|
Name : Poras_0269 (Poras_0269) Accession : YP_004441391.1 Strain : Porphyromonas asaccharolytica DSM 20707 Genome accession: NC_015501 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 329806 - 331080 bp Length : 1275 bp Strand : - Note : COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: pgi:PG0316 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRN DNA sequence : ATGCTTACCATCAAACAAATATTGGATGACCCACAGGGAGTCATCGAGCGGCTCGCCGTCAAGCACTTTCCCGCAGAAGA GCCCATAGCAGCCATCATCGCTCAGGACAAGCTAAGACGCGATGCGCAGCATAAGAAGGACGATAGCCTGGCTCAGCAAA AAGTCCTCTCACGCTCTATCGGTGAGAAGATGAAAGCGGGGGCTCGCGAGGAGGCTGAACAGCTCAAAGCTGAGGTGCAA GCACTCAAAGAGATCTCTAAGGAGGCGGAGGAGACTATGCGACAGGCTGAGGAGACCATGCGACAGCTCCTACTCTCGGT GCCTAATCTGCCACACCCCGATGTGCCACACGGTACCTCCGCAGAGGACAACCTATGCGTAGCTACGGGTGGTAAGATGC CTCACCTAGAGAATACGGCCAAGCTGCCACACTGGGAGCTGGCCAAGCAGTACGACCTCATAGACTTCGAGCTGGGAGTC AAGATAACGGGTGCTGGTTTCCCTGTGTATAAGGGTAGAGGTGCAAGACTACAGCGCGCCTTGATCAACTTCTTCCTCGA CAGAGCTACGGCGGCTGGCTTTCAAGAGGTGGAGCCTCCTATTATGGTCAATGAGGCTTCCGGTATCGGTACGGGGCAGC TCCCTGACAAGGAGGGGCAGATGTACCACGCCCAGCTGGACAACCTCTACCTCATACCGACGGCTGAGGTGCCTGTGACG AACATCTTCCGTGATGTCATCCTAGAGGCTGACCAGCTTCCTGTCTGCTGCACCGCCTACACGCCCTGCTTCCGTCGTGA GGCGGGTTCGTATGGCAAGGATGTACGCGGGCTCAACCGCCTGCATCAGTTTGACAAGGTAGAGATCGTCTCCATCGACC GCCCCGACCACTCGTGGCAGCAGCTCGACAAGATGATCGCACACGTCAAGAGCCTCGTCGAGGAGCTAGAGCTTCCTTAC CGTATCCTCCGTCTCTGTGGGGGTGACCTGAGCTTTACGAGTGCGATGACTTACGACTTTGAGGTCTTCTCGGCTGCGCA GGAGCGTTGGCTCGAGGTGAGCTCGGTCTCTAACTTCGAGAGCTATCAGGCCAACCGCCTGATGTGTCGCTACCGTGACC CTGAGGAGGGGATCACCCTCTGTCACACGCTCAACGGTAGTGCTCTCGCGCTGCCTCGCATTGTCGCTGCCCTCCTAGAG AACAATCAGACGCCCGAGGGCATTATCATCCCTGAGGCTCTGAGACCCTACACGGGCTTTGACAAGATAGACTAA Protein sequence : MLTIKQILDDPQGVIERLAVKHFPAEEPIAAIIAQDKLRRDAQHKKDDSLAQQKVLSRSIGEKMKAGAREEAEQLKAEVQ ALKEISKEAEETMRQAEETMRQLLLSVPNLPHPDVPHGTSAEDNLCVATGGKMPHLENTAKLPHWELAKQYDLIDFELGV KITGAGFPVYKGRGARLQRALINFFLDRATAAGFQEVEPPIMVNEASGIGTGQLPDKEGQMYHAQLDNLYLIPTAEVPVT NIFRDVILEADQLPVCCTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVSIDRPDHSWQQLDKMIAHVKSLVEELELPY RILRLCGGDLSFTSAMTYDFEVFSAAQERWLEVSSVSNFESYQANRLMCRYRDPEEGITLCHTLNGSALALPRIVAALLE NNQTPEGIIIPEALRPYTGFDKID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-69 | 43 |
