Gene Information

Name : Trebr_0954 (Trebr_0954)
Accession : YP_004439521.1
Strain : Treponema brennaborense DSM 12168
Genome accession: NC_015500
Putative virulence/resistance : Unknown
Product : tyrosine recombinase xerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1152139 - 1153074 bp
Length : 936 bp
Strand : +
Note : COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: ssm:Spirs_1553 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine rec

DNA sequence : 
CTGAGAATTCCCGCTGCGGAGTCCGGAACTCCGTCCTCATACATACTGTCGCTTTTTTATGCGGAATTGGTTTCCGTTGA
GCGGAAAGCGGTGATGACTGCCGAAACGTACTCGGGGGCGGTGTCGTTGTTCCTCGATTGGCTGCAAAAAAAACACCCCG
CCGAATCCGTAGAGCAGGCGCTTGAACGCGTTACGGTGCAGGATCTGCTGTATTATCTGGTTCAGCGCAAAACGGTGGGT
GCCGACGAATTGACTATCGCCAAGGATATTTCGGCGTTGCGGTCGTTTGGAAATTTTCTGGTTGCGCGGCACGTTTGGTC
CGAAAACTGTGCCTGTTTGCTTGAACGTCCTAAAGCGCGGCGCGCACTGCCGCGCGTGCTGTCTCCCGAACAGGTCGAAA
CGTTTTTGAACGCAATCGATGTATCCGAGCCGCTGGGAGTCCGCGACCGGGCGTTGTTTGAACTCATTTATTCATGCGGA
TTGCGCATCAGCGAAGCGTCGGGACTGCTGCTTCAGAATCTGCATTTGAAGGAACGGATCGTTTTGGTGCGCGGAAAGGG
CGATAAGGAGCGGATCGTGCCGTTCGGAGACGCGGCTCTGCGGTGGTTGTCGTCGTGGCTGTCGGAATATCGGCCGCAGC
TAGTCGGCAGCCGGCAGATTCCGTACGTTTTCGTGAATTATAAAGGTATGCCGCTGTCGCGCAAAGGTATTTGGAAACGT
TTTCAGGAAATCGAGGTCCGTTCCGGGGTGTCTGCAAAAGTACACACGTTGCGGCATTCTTTTGCAACCCATCTGCTTGC
CGGCGGCGCAGATTTACGTTCCGTGCAGGAACTTTTAGGGCATTCGGATCTTGTAACGACTCAAATTTACACGCATATTG
ATGACGACGAGTTACGCTTATATCACGACGAATTTTTTCCGGGGCATAAATCGTAA

Protein sequence : 
MRIPAAESGTPSSYILSLFYAELVSVERKAVMTAETYSGAVSLFLDWLQKKHPAESVEQALERVTVQDLLYYLVQRKTVG
ADELTIAKDISALRSFGNFLVARHVWSENCACLLERPKARRALPRVLSPEQVETFLNAIDVSEPLGVRDRALFELIYSCG
LRISEASGLLLQNLHLKERIVLVRGKGDKERIVPFGDAALRWLSSWLSEYRPQLVGSRQIPYVFVNYKGMPLSRKGIWKR
FQEIEVRSGVSAKVHTLRHSFATHLLAGGADLRSVQELLGHSDLVTTQIYTHIDDDELRLYHDEFFPGHKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-40 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-40 44