Gene Information

Name : Trebr_0291 (Trebr_0291)
Accession : YP_004438870.1
Strain : Treponema brennaborense DSM 12168
Genome accession: NC_015500
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 332322 - 333488 bp
Length : 1167 bp
Strand : +
Note : COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR001732:IPR014026:IPR014027:IPR017476; KEGG: efe:EFER_2111 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP

DNA sequence :
ATGAACATCACAGTCGCAGGTACCGGATACGTGGGACTTTCCATTTCGATTCTGTTGGCGCAGCATAATGAGGTCGTCGC
GTTCGATATACTTCAGCGGAAAGTCGATTTGGTAAACGATAAAAAATCTCCGATCGCGGATACTGAAATTCAGGAATATC
TTGCGGAAAAAGAACTGCATCTCAGTGCAACGACTGACATTGGCGTAGCATATGCCGAACCTGATTTCGTTATTATTGCG
ACGCCGACTGATTACGATGCCGAAAAGAATTTTTTCAATACGTCGTCGGTGGAATCCGTTCTCCGTGATATTGAAAAGTA
TTGTCCGCACGCCGTCGCCGTTATCAAATCGACGATTCCCGTCGGATTTACGGAACGAATGCGAAAAGAACATCCTTCGC
TTAAAATCATGTTTTCTCCGGAATTTTTACGGGAAGGCAAAGCGCTGTATGATAATCTGTATCCTTCACGGATCATCGTC
GGTGATACGTCTGCCGATGCCCGTATGTTCGCCGCGTTGTTGCAGGAAGGGGCCGTAAAACGGGATATTCCCACGCTTTT
TATGCCGCCGACCGAGGCAGAAGCGGTAAAGCTGTTCGCCAACACGTATTTGGCGCTGCGCGTCAGCTATTTCAATGAAC
TTGATACCTATGCGGAAGTCCGCGGACTCGATACGGCGCAAATAATAAAAGGCGTCAGTCTTGATCCCCGAATAGGCAAT
ACGTATAATAATCCGTCTTTCGGGTACGGCGGATATTGTCTGCCGAAAGACTCGAAGCAGTTGTTGGCAAATTATCAAAA
CGTTCCGCAAAATCTGATCACGGCGATCGTCGATGCGAATAAAACCCGTAAAGAATATATTGCTCAGCGCATATTATCCA
GACATCCCGATACCGTTGGAATTTACCGGTTAACGATGAAGGCGAATTCCGACAATTTCCGCCAGTCTTCAATTCAGGAC
GTGATGAAATTATTGCGGGGTGAAGGAATTGCTGTCGTAATTTATGAACCGGCTCTGAGCGGAACCGTTTTTGAAAAATA
TCGGGTCGAAAACGATTTTAACGTATTCAAATCCGAATGCGACGTGATCGTTGCAAACCGATTCAGTGAAGAACTTTCGG
ATGTAAAACGGAAAGTGTATACGAGAGATATTTTTTTGAGAGATTAA

Protein sequence :
MNITVAGTGYVGLSISILLAQHNEVVAFDILQRKVDLVNDKKSPIADTEIQEYLAEKELHLSATTDIGVAYAEPDFVIIA
TPTDYDAEKNFFNTSSVESVLRDIEKYCPHAVAVIKSTIPVGFTERMRKEHPSLKIMFSPEFLREGKALYDNLYPSRIIV
GDTSADARMFAALLQEGAVKRDIPTLFMPPTEAEAVKLFANTYLALRVSYFNELDTYAEVRGLDTAQIIKGVSLDPRIGN
TYNNPSFGYGGYCLPKDSKQLLANYQNVPQNLITAIVDANKTRKEYIAQRILSRHPDTVGIYRLTMKANSDNFRQSSIQD
VMKLLRGEGIAVVIYEPALSGTVFEKYRVENDFNVFKSECDVIVANRFSEELSDVKRKVYTRDIFLRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-88 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Trebr_0291 YP_004438870.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-97 56