Gene Information

Name : Trebr_2258 (Trebr_2258)
Accession : YP_004440798.1
Strain : Treponema brennaborense DSM 12168
Genome accession: NC_015500
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 2676266 - 2678233 bp
Length : 1968 bp
Strand : -
Note : COGs: COG0021 Transketolase; InterPro IPR005474:IPR005475:IPR005476:IPR005478; KEGG: tde:TDE1308 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Transketolase; SPTR: Transket

DNA sequence :
ATGAATTTAAAAGGTCTTGAAGCAGTCGCGCTTTCCATCCGCAGCTTATCGATGGATGCAATCCAAAAAGCCAAATCGGG
GCACCCGGGCCTTCCGCTCGGTTGTGCGGAATTGGCGGCCGTTTTGTACGGCGAAATCATGAAGCATAATCCTGCTGATT
CACATTGGGCAGACCGCGATCGTTTTTTATTGTCCGCCGGTCACGGCTCGATGCTGCTGTATTCGATCCTGCATTTGAGC
GGATACGGCGTTACTACTGATGATATCCGTGCGTTCCGGCAAGTCGGCTCAAAGTGCCCCGGGCATCCCGAATACGGCTG
GACCGACGGCGTTGAAAATACGAGCGGTCCGCTGGGACAGGGCGTCGCGCTGGCCGTCGGTGAAGCGATCGCCGAAACGA
TGCTCGCCTCCCGGTTCAATACCGCCGAACATACGATCGTAGATCACTATACGTATTCACTGGTCGGCGAAGGCTGTCTT
ATGGAAGGCGTTTCTTCCGAAGCGTCGAGCCTAGCCGGGCATCTGAAACTCGGCAAACTGATCGTATTTTACGATGAAAA
TAAAATAAGCATCGACGGTTCTACCGACGAAGCGTTTACCGAAGACGTTGCGATGCGCTACAAAGCGTACGGCTGGCAGG
TGCTGTCCGGTTCCATGTACGATATGGAAGGAATTGCGGCGCTTGTTGCGCAGGCAAAGGCCGATACCGAACGGCCCTCG
CTGATTATGTTGAAATCGGTGATCGGCAAAGGTTCTCCGGTGGAGGGAACCGCCGCAGCGCACGGTGCGCCGCTCGGCGA
CGAAAACGTTGCGAAAGCTAAGAAAAAACTCGGACTGGATCCGGAAAAGTTCTTTTACGTAGATTCTGCCGCATACGAAT
ATTTTGACCGGAAAAAAGCCGCGTTCACTCAGGCCGAGGCCGACTGGAACGCGGTGTTCGCCGCTTGGTCAGCCGCGAAC
CCGCAGCTGCGTGCGCAATGGGACGCGATGCGTTCGCGTTCCGTAAGCGGCGAGGGTGCCGTTCCCCGGTACGCGGCGGG
CGATTCGCTTGCGACGCGCAAGGCGTCCGGCGCGATGCTTGCTTCTTTGGCCGCGCGCTGTCCGGCGCTCGTCGGCGGGT
CGGCGGATCTTGAAGGCCCGAACGCGACGGCGCTTCCCGGTTACGGTATTTACTCGGCTCAAAACAGGGGCGGCCGTACG
ATCCGGTTCGGCATCAGGGAATTCGCGATGGCGTGCGTAACGTCCGGTATCACCCTGCACGGCGGATTGCGCGGGTTCTG
CGCGACTTTCGCCGTCTTTACCGACTATATGCGTCCCGCGATGCGTCTGGCGGCGCTGATGAAGCTGCCGGTGCTGTACG
TTTTAACTCACGATTCGATTTACGTCGGGGAAGACGGCCCGACGCATCAGCCGATTGAAACGATTTCGTGCGTGCGCGCG
ATTCCCGGTATGCAGGTTATCCGCGCCGGCGACGCGGAAGAAACGGTCGAAGCGTGGAATATGGCGATGTCGGTTACCGA
TCATCCGGTGTGTCTGTTTTTTACGCGGCAGAATATTACCGTTTATGAAAAAGACGATCCCGACTGGCGCAATACGATGC
GCTGCGGTGCGTACGTCGTCCGGCGCGGAGCAGACGTCCCGGACGTTACCGTGCTTGCAACCGGTTCGGAAGTGGAACTC
GCGCTGAACGCGGCGAAACTCGTGAACGGAAAAACCGTCCGCGTCGTGTCGGTGCCCGACCGGGAACTGTTCGCATCGCA
GCCGGCCGCGCTGCGTAAATTGATTACCGGAGCCGCTCCGCGCGTTATTGTCGCAGAAGCGGGCAGTAAGCTCGGTTGGG
AAGGTTTCGTTTCCGCCGAAAAAGACATTTTTTGCTTGAAAGATTTCGGTGCATCAGGTCCCGCGAAAAAAGTTGCGGAG
CACTTCGGTTTTACGGCGGAAAAGCTCGCCGAATTGATTTCTCAGTAA

Protein sequence :
MNLKGLEAVALSIRSLSMDAIQKAKSGHPGLPLGCAELAAVLYGEIMKHNPADSHWADRDRFLLSAGHGSMLLYSILHLS
GYGVTTDDIRAFRQVGSKCPGHPEYGWTDGVENTSGPLGQGVALAVGEAIAETMLASRFNTAEHTIVDHYTYSLVGEGCL
MEGVSSEASSLAGHLKLGKLIVFYDENKISIDGSTDEAFTEDVAMRYKAYGWQVLSGSMYDMEGIAALVAQAKADTERPS
LIMLKSVIGKGSPVEGTAAAHGAPLGDENVAKAKKKLGLDPEKFFYVDSAAYEYFDRKKAAFTQAEADWNAVFAAWSAAN
PQLRAQWDAMRSRSVSGEGAVPRYAAGDSLATRKASGAMLASLAARCPALVGGSADLEGPNATALPGYGIYSAQNRGGRT
IRFGIREFAMACVTSGITLHGGLRGFCATFAVFTDYMRPAMRLAALMKLPVLYVLTHDSIYVGEDGPTHQPIETISCVRA
IPGMQVIRAGDAEETVEAWNMAMSVTDHPVCLFFTRQNITVYEKDDPDWRNTMRCGAYVVRRGADVPDVTVLATGSEVEL
ALNAAKLVNGKTVRVVSVPDRELFASQPAALRKLITGAAPRVIVAEAGSKLGWEGFVSAEKDIFCLKDFGASGPAKKVAE
HFGFTAEKLAELISQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-118 45
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-111 43