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Name : Trebr_2166 (Trebr_2166) Accession : YP_004440711.1 Strain : Treponema brennaborense DSM 12168 Genome accession: NC_015500 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2562333 - 2563616 bp Length : 1284 bp Strand : + Note : COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: vvy:VVA1200 TRAP-type C4-dicarboxylate transport system, large permease component; PFAM: TRAP C4-dicarboxylate transport system permeas DNA sequence : ATGATCATGCTGTTCACGTTTCTGTTATGGTTTATCCTGATATTCCTCGGCGTACACATCGGCTATTCGCTGATAATCGT TTCATTGGTATTCTTTGCGGCAACCGGCAATCTGATGCTGCTGCCGTTCGCGTTCAAGGAAATGCTTGCGGGCATCAACA ATTTTACGCTCCTCGCCGTACCGTTTTTCGTTCTTGCCGGAAATCTGATGAACGGCGGCGGCGTTACGAACCGGATATTC AGTTTCGCACGTTCCATGATCGGACACCGTAAAGGCGGACTCGCCCACGTAAACGTGATGGCGTCGCTGATTTTTTCGGG AATGAGCGGCTCGGCGCTCGCGGACGCGGGCGGACTGGGACAGCTTGAAATCAAAAGCATGCGGGACGCCGGATACGACG ACGGATTTGCCGGAGGCATCACCGCGGCCAGCTGTATCATCGGACCGCTCATTCCGCCGTCAACGCCGCTCATCATTTAC GCCGTCGTTGCCAATCAATCCGTTGAAAAACTGTTCATGGCGGGATTTCTTCCGGGACTGCTGACGACCGGAATGCTCAT GCTGATGTGTTCGATTCTTGCGCACAAACGCAATTATCCGGCCGAACAGAAATGTACCGCAGTGGAACGGTGGCACAGTT TCAAAAATTCCGTTTGGGCGCTGCTGACGCCGGTCATTATTCTGGTCGGCATATTTTCCGGTATCTTTACGCCGACCGAA GCCGCCGTCGTGGCGGCCGCGTATACGACGGTACTGGGATTTTTCGTATACAAAGAACTCACCCTGAAAAAATTCTTTGA AATCGTACTTGAAAGCGTCAAAACGACCGGAACCATCGTCATGATGATTTTGGGCGTTACGCTGTTCGGCTGGATTATTG CCCGCGAACAGATGCCGCTGCACGTCGCCGAATTTTTCATGAACTTCGTATCGAATCCGATAACGCTCATGCTGATGATA AACGTTCTGCTGCTGTTCTTGGGAACCGTCATCGACGCGCTGCCGCTGCTGATCATACTGATACCGATACTGCTGCCCAC CGTAGTCGCCGCCGGTATAAATCCGATACACTTCGGCGTCGTCGTCATATTCAATTTGATGATCGGTATTCTGACGCCGC CGATGGGAACGGCGCTGTTCGTCGTGTCGCGGGTGGGAAACATGCCGTTTAAAACGCTCATGAAAGGCGTGGTACCGTTT CTGATTCCGCTGCTGATAACGCTCGTGCTGCTTTCGATTTTTCCGCAAATCACGCTCCTGCTGCCGACGCTGCTCGGCGG CTGA Protein sequence : MIMLFTFLLWFILIFLGVHIGYSLIIVSLVFFAATGNLMLLPFAFKEMLAGINNFTLLAVPFFVLAGNLMNGGGVTNRIF SFARSMIGHRKGGLAHVNVMASLIFSGMSGSALADAGGLGQLEIKSMRDAGYDDGFAGGITAASCIIGPLIPPSTPLIIY AVVANQSVEKLFMAGFLPGLLTTGMLMLMCSILAHKRNYPAEQKCTAVERWHSFKNSVWALLTPVIILVGIFSGIFTPTE AAVVAAAYTTVLGFFVYKELTLKKFFEIVLESVKTTGTIVMMILGVTLFGWIIAREQMPLHVAEFFMNFVSNPITLMLMI NVLLLFLGTVIDALPLLIILIPILLPTVVAAGINPIHFGVVVIFNLMIGILTPPMGTALFVVSRVGNMPFKTLMKGVVPF LIPLLITLVLLSIFPQITLLLPTLLGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-81 | 60 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 6e-81 | 60 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-81 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Trebr_2166 | YP_004440711.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 3e-81 | 60 |
