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Name : Trebr_2164 (Trebr_2164) Accession : YP_004440709.1 Strain : Treponema brennaborense DSM 12168 Genome accession: NC_015500 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctP Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1638 EC number : - Position : 2560771 - 2561757 bp Length : 987 bp Strand : + Note : COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: fnu:FN1472 N-acetylneuraminate-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: N-acetylneuraminate- DNA sequence : ATGAAAAAAATACTCGCAATCGCTTCCGCACTATGCGCGGCGGGAATACTGTTCGCCGCCGGCGGAAAAGAAGCCGGAAC GGAAAAAACAGTAACGCTGAAACTCGGTTTTCAGGCCAACACATCCTCAAAAGAATACGAGGCCGCCCAAAAATTCGCCG AAGAAGCGAAGGCTCTTTCCGGCGGGACCGTCAACGTTCAAATCTTTGCCGGCGGACAATTGGGCGACGACCGGTCCATG CTCGAACAGGTCGCCGCGGGCGCGCTCGACTTGGTATACGCGGAAACGGGCCGATTCGGCTTGTGGATTGAAGAAGCCGA GATTTTCAGCTATCCGTTTGCGTTCAACGACTTTGCTCATCTGGAGCGGACGCTCGCTTCGGACTACGGAAAATCGCTTC ATGCGAAATTTCTTGAAAAAGGCTGGCGTATCCTCGCCACCGGATACAACGGTACGCGCCAAACCACGTCCAACCGGCCC ATCAATTCGATTGCCGATATGAAAGGCATGAAACTGCGCGTTCCGAACGCGGCGGCCAACCTGAACTTTGCCAAATACGC AGGCGCGGCTCCCACGCCGATGGCGTTTGCCGAAGTATACCTCGCGCTCAAAACGAACGCCGTCGACGGTCAGGAAAATC CGCTTTCAACCATTGACGTGCAGAAATTTTACGAAGTTCAAAAATATTGCGCGCTTACCGGCCATATTCTGAACGACAAC AACATCGTGATGAGCGAAATCATTTACAAAAAACTGAGCGACCATCAAAAAGAAGCCGTTACGGAAGCGGCAAAACGGGC GGCCGCGTATCAGACCGAATTATTCACGGCGGACGAAAGCCGTCTGATCGAAGTATTTAAAGCGAACGGCATGACCGTCA CCGCACCCGATAAAGCGCCGTTCCGCGCAGCCTGCCAACCGATGTACGACGAATACACGGCCAAATACGGCAGTGCGGCC GTAAACGCAATCAACGCGTCCAGATAG Protein sequence : MKKILAIASALCAAGILFAAGGKEAGTEKTVTLKLGFQANTSSKEYEAAQKFAEEAKALSGGTVNVQIFAGGQLGDDRSM LEQVAAGALDLVYAETGRFGLWIEEAEIFSYPFAFNDFAHLERTLASDYGKSLHAKFLEKGWRILATGYNGTRQTTSNRP INSIADMKGMKLRVPNAAANLNFAKYAGAAPTPMAFAEVYLALKTNAVDGQENPLSTIDVQKFYEVQKYCALTGHILNDN NIVMSEIIYKKLSDHQKEAVTEAAKRAAAYQTELFTADESRLIEVFKANGMTVTAPDKAPFRAACQPMYDEYTAKYGSAA VNAINASR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1779 | NP_231414.1 | C4-dicarboxylate-binding protein | Not tested | VPI-2 | Protein | 6e-64 | 50 |
| dctP-1 | YP_001217320.1 | C4-dicarboxylate-binding periplasmic protein | Not tested | VPI-2 | Protein | 6e-64 | 50 |
| VPI2_0027c | ACA01844.1 | C4-dicarboxylate-binding periplasmic protein | Not tested | VPI-2 | Protein | 4e-64 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Trebr_2164 | YP_004440709.1 | TRAP dicarboxylate transporter subunit DctP | VFG1112 | Protein | 3e-64 | 50 |
