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Name : Trebr_1316 (Trebr_1316) Accession : YP_004439874.1 Strain : Treponema brennaborense DSM 12168 Genome accession: NC_015500 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1559765 - 1561117 bp Length : 1353 bp Strand : + Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593:IPR001482; KEGG: hor:Hore_05970 Tfp pilus assembly protein PilB; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: DNA sequence : ATGATGAATAAATATCTGCTTCCCGATTTCTGCAACAGAAACCGCGTGATCATATTGGCAAACGAAGAGCACGCGCTGAC GATCGGAATGGTACATCCGGAAAATACGGTTCTCCGAAAACGTATCGAACGGTATTTCGGACAGGAAAAAACGATTGCGT TTCGGAAAATTTCGGCGGAAGATTTTGAAGTACGAATGAGCAGATTCTTTGCCGGAGAATACGGATTCGATTCATCCGAT ACGGACAAAACTGCCGGCGGCGTAACGCCGGATGCAGGCGGTACCGACATATTGACGACGATGGCGACGGATTCACCGAT CGTAAATCTTTTAAATAGTATCTTTTTGGAAGGCGTCGCCTGCAGGGCTTCCGACATTCACATAGAATCGGCGGAACAGC TGTCCCGCGTCCGCTACCGAACGGACGGACGGTTACGGACGGCGTTGGTATTGGATACGGATAAAGCGGCCGCGCTTATT TCACGGGTTAAACTGCTCGCCAACTTAAACGTTCTTGAAAAACGCCGGCCGCAGGACGGCCGGCTGCAATTTACCCGTAA CGGTCACGATTTGGACGTGCGCATATCGATACTGCCTTCCGTATACGGTGAATCAGCCGTTCTCCGCTTATTGGATACGG GCGCGCGGCCGCTCGTTTTGGACGAACTGGGATTTTCCGTTCCGCATACGGCTCTGATACGGAAGCTGCTTTCAACACCG TACGGGCTCATTCTGGTAACGGGACCAACCGGTTCCGGAAAGACGACGACGCTCGCCGCCTTTCTCGCGGAAATAAACAC GCCGGATATAAAAATTATCAGCGTGGAAGATCCGGTCGAATACCGGATTCCCGGTATCCTGCAGATTCAAACCGATGAAA ACGCCGATCTCACCTTCGACGTGCTGCTCAAACGGATACTGCGGCACGATCCGGACATTATCATGGTAGGTGAAATCCGC GACGAATCGACCGCCGAACTCGCCGTCAGAATGGCGCTCACCGGCCATCTGGTTTTCGCGACGCTGCATACGAACACGAC GGCGGAAACGCCGCTGCGTCTCTGCAATATGGGAATCGCGCCGTATTTGATCGCCGCGGTACTGAAAGGAATTATCGCGC AGCGGCTGTTGCTCAAAAAAAACGGGAAGGGAAGAACCGTCGCCGCCGAAATACTCGCCGTCGATCAGGCCGCAGCGGAC ATTATCGCCGCAGGCTGCGACCGGAACGCGCTTACGAGGTATCTTCAAGATCGGGAGTTTCTTTTTCTTGAAGACGATAT CGAAGAAAAAATCAAAAACGGTATTATAGAGGATGCGTATGCGAACAAATACGTCGATACTTCTCTTTCTTGA Protein sequence : MMNKYLLPDFCNRNRVIILANEEHALTIGMVHPENTVLRKRIERYFGQEKTIAFRKISAEDFEVRMSRFFAGEYGFDSSD TDKTAGGVTPDAGGTDILTTMATDSPIVNLLNSIFLEGVACRASDIHIESAEQLSRVRYRTDGRLRTALVLDTDKAAALI SRVKLLANLNVLEKRRPQDGRLQFTRNGHDLDVRISILPSVYGESAVLRLLDTGARPLVLDELGFSVPHTALIRKLLSTP YGLILVTGPTGSGKTTTLAAFLAEINTPDIKIISVEDPVEYRIPGILQIQTDENADLTFDVLLKRILRHDPDIIMVGEIR DESTAELAVRMALTGHLVFATLHTNTTAETPLRLCNMGIAPYLIAAVLKGIIAQRLLLKKNGKGRTVAAEILAVDQAAAD IIAAGCDRNALTRYLQDREFLFLEDDIEEKIKNGIIEDAYANKYVDTSLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-59 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-59 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Trebr_1316 | YP_004439874.1 | type II secretion system protein E | VFG2048 | Protein | 3e-59 | 41 |
