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Name : Trebr_1127 (Trebr_1127) Accession : YP_004439689.1 Strain : Treponema brennaborense DSM 12168 Genome accession: NC_015500 Putative virulence/resistance : Unknown Product : integron integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1342819 - 1344015 bp Length : 1197 bp Strand : + Note : COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011946:IPR004107:IPR002104; KEGG: cph:Cpha266_0257 integron integrase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Similar to site-specific tyrosine recombi DNA sequence : ATGAATGTTACGCTGTTCAGTATTGAAGAAAATAGAATTGCAGTTTCTTTCGATTATAATTCGACTGTTCTCAATGCTGT CAGAAAAATTCCCGAAAGACAGTGGAGTGCAACCCGAAAGTTTTGGTCTGTTCCGAATACACAAAAAACGATTGATCTGC TGCTTGAAACCCTGGCGGAAACGCACCTTTTTGATTATTCTGCGCAGAATCCGGTTTCAAATCCCGATTCCGTACGATGC GGAATACCGGATATCACAAAATATGTAACGTTACTTGAAGCAAAACACTACAGCCGTCGAACCGTACAGGCATATGCAAA ATGGCTGATTGCATTCGGTAAACGTTTTGCCTCCATACCTTCGGCTCTGTTATCTCAAACTGAAATTAACCTTTTTCTGA CTGAACTCGTTACGGAAAAAAACGTCAGTGCTTCAACGCAAAATCAGGCGCTGGCTGCGCTCCTTTTTTATTTCAGATAT ATAAAAGGAACTGAACCTTGCAATCTTGCATCCGTTATTCGGGCAAAAAAAACGGTACATATTCCGGTAGTATTCAGTAA AGATGAAGTACGTGCAATCTTTGATCAGCTGTCGGATGAAAAACTGCTTATTGCACAACTGCTGTACGGAACCGGTATGC GTTTAAGTGAATGTCTCTGTCTGCGCATACAGGACATTGATTTTGCGCATAATATGATTATCATACGGAATGGAAAAGGG GCAAAGGACAGACGGACGATGCTGCCGCACATACTTGAAAAAAAAATACGTGCGCATATCGTTTCTGTAAAGCAACTGCA TCAGGCAGACATCGCCGACGGATGGGGTGTCGTTACACTCCCTTTTGCCTTGCGTAAAAAATATTCCGGCGCTTCCGCCG ATTTTGCGTGGCAGTGGGTATTTCCGCAAAAAAATCGATGGAAAAATACGGATACCGGTATGCAGGGGCGCTACCATATT GATGCATCGATAATGGAACGAGCCGTACAAAAAGCCGTGCGGGATGCCGGTATTTATAAACGGGGAAATTGTCATACATT CAGGCATTCCTTTGCTACTCATTTGCTTGAAAACGGATATGATATCCGCACCGTGCAGGAACTGCTTGGTCATTCGGATG TAAAAACGACCATGATTTATACGCACGTGTTGAATAAGGGGCCTTCCGGAGTGAGCAGTCCGTTAGATCGTTTGTAG Protein sequence : MNVTLFSIEENRIAVSFDYNSTVLNAVRKIPERQWSATRKFWSVPNTQKTIDLLLETLAETHLFDYSAQNPVSNPDSVRC GIPDITKYVTLLEAKHYSRRTVQAYAKWLIAFGKRFASIPSALLSQTEINLFLTELVTEKNVSASTQNQALAALLFYFRY IKGTEPCNLASVIRAKKTVHIPVVFSKDEVRAIFDQLSDEKLLIAQLLYGTGMRLSECLCLRIQDIDFAHNMIIIRNGKG AKDRRTMLPHILEKKIRAHIVSVKQLHQADIADGWGVVTLPFALRKKYSGASADFAWQWVFPQKNRWKNTDTGMQGRYHI DASIMERAVQKAVRDAGIYKRGNCHTFRHSFATHLLENGYDIRTVQELLGHSDVKTTMIYTHVLNKGPSGVSSPLDRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 4e-61 | 49 |
| intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-61 | 49 |
| intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 2e-60 | 49 |
| EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 9e-61 | 49 |
| intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 4e-61 | 49 |
| intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 2e-60 | 49 |
| intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 6e-61 | 49 |
| intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-61 | 49 |
| intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-60 | 49 |
| intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 6e-61 | 49 |
| intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-61 | 49 |
| intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-60 | 49 |
| intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 6e-61 | 49 |
| intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-61 | 49 |
| intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 2e-60 | 49 |
| intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 6e-61 | 49 |
| intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-61 | 49 |
| unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 6e-61 | 49 |
| intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 2e-60 | 49 |
| intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-61 | 49 |
| intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 6e-61 | 49 |
| intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 2e-60 | 49 |
| intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 4e-61 | 49 |
| unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 5e-61 | 49 |
| intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 2e-60 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Trebr_1127 | YP_004439689.1 | integron integrase | VFG1028 | Protein | 3e-61 | 49 |
