Gene Information

Name : Thena_0784 (Thena_0784)
Accession : YP_004437548.1
Strain : Thermodesulfobium narugense DSM 14796
Genome accession: NC_015499
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 765257 - 767659 bp
Length : 2403 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176:IPR003959:IPR013093:IPR019489:IPR 003593; KEGG: ATP-dependent Clp protease ATP-binding subunit; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AA

DNA sequence :
ATGAATCCAGATAAATTTACAGAACAGTTAAGAGACTCTTTGGAGTCTTCACAAAGAGTCTTAATGAAGTTCCAAAATAG
CCAACTTGATGTAGAACATCTTTTATATGCGATGCTTACTCAACAAGATGGTCTTGTAGGGAAGGTTTTGACTAGAGCTG
GAATTAATAAAAATGATATTAAAAATAGACTTGAATCTATTTTGAATAGGTTACCAAAGATACAATATTCATCTTCTACT
CCCCAAATTTATATTACTCCATCTTTGAAGAAGGTTTTAGATATAGCTGAAGAAGAGGCGATCAGATTAAAAGACGAATT
TGTTGGAGTAGATCACGTTTTGATTGCAATAGTAAAAGAAGGCGAGAGTCCAGCGTCACGCCTTTTAAACGAGTATGGTA
TCACAGAAGAAAAGGTTTATCAAATTCTTAAAGATATAAGAGGTACACAAAGAGTGACAGATCCAGGTGCAGAAGAAAAA
TATCAAGCTCTTGAAAAGTATACAAGAAATTTAACTCAACTTGCATTAGAGGGCAAGTTAGATCCTGTAATCGGTAGAGA
TGAAGAAATTGAGAGAGTTATGCAGATTCTTTCTAGAAGAACGAAAAACAACCCGGTTTTAATTGGTGAGCCCGGTGTTG
GAAAAACGGCTATTGTTGATGGAATTGCACAAAAGATAGCTTCCAACGATGTGCCTGAGATATTAAAGGGAAAACAACTT
TTAGCTCTCGACATGGGCGCCTTGATAGCTGGTACTAAATTTAGAGGTGAATTTGAGGAAAGGTTAAAAACAATCATTGA
TTCTGTAACTAAAACTCAAAATTATATTTTGTTCATTGATGAATTACATACTGTAGTTGGAGCAGGCGCTGCAGAAGGTG
CCATTGATGCATCAAATTTACTTAAACCTGCTCTTGCAAGAGGTGAATTAAGGGTAATAGGTGCCACTACTCTTGATGAA
TATAAAAAATATATAGAAAAAGATCCTGCCCTTGAAAGAAGATTTCAACCTGTTTTTGTAAAAGAACCAAGCGTAGATGA
TACTATTTCTATTTTAAAAGGTTTAAGAGATAAATATGAGGCGCATCATAGGGTAAAAATTACAGATGAGGCAATTGAAT
CGGCTGCACATCTTTCCGAAAGATACATATCTGATAGATTTTTGCCAGACAAGGCTATTGATTTGATTGATGAAGCTGCT
GCTAAAGTAAGAATTCAACTTTCTAATATGCCTACAGAACTTAAGGAAATGGAAAATAAGTTATCAAGGTTATATCAAGA
GGGACAAGAAGCTGTAAAAAGAGAGGACTACGAATTAGCAGCAAAGCTAAAGAGCGAATCTGAAGCTCTTTCTAAAGAAT
TTAAAGAGAAAAGGGATAAATGGCTAATTGACAAGAAAGTTAACGAAGTAGTAGACAAAGAAGACATTGCAAATTTGGTT
TCTAAATGGACAGGTATACCGGTTACAGAGCTTGTTCAAGAAGAAGTCGACAAATTAACTAATATGGAGAGCATTTTACA
TAAAAGAATTATTGGCCAAGATGAGGCTGTAGTTGCTGTTTCCGAGGCAATAAGGAGGTCAAGGTCAGGCCTGAAGGATC
CGAGAAGGCCAGTAGGATCATTTCTCTTCCTTGGTCCAACTGGTGTGGGCAAAACTGAGTTAAGCAAAGCCCTTGCTGCA
TTTTTATTCAAGGATGAAAATGCTTTAGTTAGAATTGATATGTCAGAATATATGGAGAAGCACTCAGTTTCGAGGTTGGT
AGGAGCTCCTCCTGGTTATGTAGGTTATGAAGAGGGTGGCCAATTAACAGAAGTTATCAGAAGAAGACCTTATTCTGTTA
TACTCTTAGACGAGATAGAAAAGGCTCATCCTGACGTTTTTAATATACTCTTACAGGTTCTTGACGATGGAAGATTGACA
GATGGTAAGGGTAGGACTATAGATTTTAGAAATACTGTTATAATAATGACATCTAATCTTGGTTCTGATATACTATTAAA
TTCCAATGTTGAAGATGAAAGGGAATTTGAAAAGGCAAAGAACAGAGTTTTATCGCTATTAAATTCTACATTTAGACCAG
AATTTTTAAATAGAATAGATGAAATTGTGGTTTTTAAACCTCTTTCTAGATCTGATATTGAAAAAATTGTTGAATTGATA
TTAAATGATATTCAAGAAAGATTGAATGAAAAGAAAATAAAACTAATACTTACCGAGGAAGCAAAGAAGTTTTTTGCGAA
AGAGGGATATGAACCTACGATGGGAGCTAGACCTCTTAAAAGATATATACAGAAAAATTTGGAAAATCTTATTGCAAAGG
AGCTTTTGAACAATAAAATTAAGGAAGGAGATACTGTGAAAATAGTGGTAGATAACAATAAGATTGGGTTGGTAGTTGAA
TAG

Protein sequence :
MNPDKFTEQLRDSLESSQRVLMKFQNSQLDVEHLLYAMLTQQDGLVGKVLTRAGINKNDIKNRLESILNRLPKIQYSSST
PQIYITPSLKKVLDIAEEEAIRLKDEFVGVDHVLIAIVKEGESPASRLLNEYGITEEKVYQILKDIRGTQRVTDPGAEEK
YQALEKYTRNLTQLALEGKLDPVIGRDEEIERVMQILSRRTKNNPVLIGEPGVGKTAIVDGIAQKIASNDVPEILKGKQL
LALDMGALIAGTKFRGEFEERLKTIIDSVTKTQNYILFIDELHTVVGAGAAEGAIDASNLLKPALARGELRVIGATTLDE
YKKYIEKDPALERRFQPVFVKEPSVDDTISILKGLRDKYEAHHRVKITDEAIESAAHLSERYISDRFLPDKAIDLIDEAA
AKVRIQLSNMPTELKEMENKLSRLYQEGQEAVKREDYELAAKLKSESEALSKEFKEKRDKWLIDKKVNEVVDKEDIANLV
SKWTGIPVTELVQEEVDKLTNMESILHKRIIGQDEAVVAVSEAIRRSRSGLKDPRRPVGSFLFLGPTGVGKTELSKALAA
FLFKDENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVIRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLT
DGKGRTIDFRNTVIIMTSNLGSDILLNSNVEDEREFEKAKNRVLSLLNSTFRPEFLNRIDEIVVFKPLSRSDIEKIVELI
LNDIQERLNEKKIKLILTEEAKKFFAKEGYEPTMGARPLKRYIQKNLENLIAKELLNNKIKEGDTVKIVVDNNKIGLVVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 48
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-102 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thena_0784 YP_004437548.1 ATPase AAA VFG0079 Protein 0.0 54
Thena_0784 YP_004437548.1 ATPase AAA VFG0080 Protein 4e-155 52