|
Name : Thena_0080 (Thena_0080) Accession : YP_004436863.1 Strain : Thermodesulfobium narugense DSM 14796 Genome accession: NC_015499 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 77164 - 78213 bp Length : 1050 bp Strand : + Note : COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_0760 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Integrase catalytic region; IMG reference gene:2504783443; PFAM: Integrase core domain DNA sequence : TTGATTCACACACTGTATGCACAGGGAGTTTCCATAAGAAAGATTGCCCATATGTTGGGCATTAATAGACGGACTGTCTC AAAGAGATTAAAGGAGAAGGATTTAGAACCCTACAGCAAAAGGACTTATCCTTCAAAACTTGATAAATTCAAAGACTACA TAAACAAAAGGATAAGTCAGGCTCATCCAGACAAAATTCCATCTACAGTGCTTTTGAATGAAATTAAGGATATAGGATAT GAAGGAAGTCTAAGAATACTTCAGGAATACACAAAATCAGTTTATGACAAACTAAAGCTAAATAAAAAAGAAAATGAGGA AATTATCAGGTTCGAAACAGATAGAGGCTTTCAAGCTCAAGTTGACTGGACAACTGTTAGAAGTGGAAAGAAGCCAATCT ATGCTTTTGTTATGGTTTTATCCTATTCAAGAGCAGCTTTTGTTTACTTTACAGACAACATGTGGCAGGACACATTCCAA TCCTGCCACATAAAAGCGTTTGACTACTTTGGCGGGATACCAAAGACTATACTCTATGATAACCTAAAATCTGTAGTAAT TCAAAGAGATAAATATGGGCAAAATGAACATGGCTTTAACAACAAATTTCTTGATTTTTCCAAAGGTCTATTTATACCAA AACTATGTAAGCCCTACAGAGCTAAAACCAAGGGAAAGGTTGAAAGATTCAATCTATATCTAAAAAATAACTTTTATAAA CCATTGAAGGCAAAGCTAAAGAATACGCCAATAGATATAACACCAGATCTCTTAAATGCCTATATATTTTCCTGGCTTAC CAGTGCAAATAACAGGATTCATGCAACAACAAACAAAAAACCCTTTGATATGTTAAAAGAGGAACTAAGTTATTTAAGTA AAGTACCAAATAATCTATTTGTAAGTGAAAAAGATAGTAATAAAAATAATATTAAAGATAGTAATAAAAACAGTAAGAAA GAAGTTTACATGGACAAAAGCTTTCATCCTTACTACACAAACCTTTCTGAGTATGAAAAGCTCTTAATAGGAGAAGACAA CTATGCTTAA Protein sequence : MIHTLYAQGVSIRKIAHMLGINRRTVSKRLKEKDLEPYSKRTYPSKLDKFKDYINKRISQAHPDKIPSTVLLNEIKDIGY EGSLRILQEYTKSVYDKLKLNKKENEEIIRFETDRGFQAQVDWTTVRSGKKPIYAFVMVLSYSRAAFVYFTDNMWQDTFQ SCHIKAFDYFGGIPKTILYDNLKSVVIQRDKYGQNEHGFNNKFLDFSKGLFIPKLCKPYRAKTKGKVERFNLYLKNNFYK PLKAKLKNTPIDITPDLLNAYIFSWLTSANNRIHATTNKKPFDMLKEELSYLSKVPNNLFVSEKDSNKNNIKDSNKNSKK EVYMDKSFHPYYTNLSEYEKLLIGEDNYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 4e-58 | 45 |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 6e-58 | 45 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 4e-58 | 45 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 6e-58 | 45 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 3e-58 | 45 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 6e-58 | 45 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 6e-58 | 45 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 4e-58 | 45 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 4e-58 | 45 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 4e-58 | 45 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 4e-58 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thena_0080 | YP_004436863.1 | integrase catalytic subunit | VFG1607 | Protein | 2e-58 | 45 |
| Thena_0080 | YP_004436863.1 | integrase catalytic subunit | VFG1514 | Protein | 2e-58 | 45 |
| Thena_0080 | YP_004436863.1 | integrase catalytic subunit | VFG1461 | Protein | 2e-58 | 45 |
| Thena_0080 | YP_004436863.1 | integrase catalytic subunit | VFG1626 | Protein | 2e-58 | 45 |
