Gene Information

Name : Thena_0408 (Thena_0408)
Accession : YP_004437182.1
Strain : Thermodesulfobium narugense DSM 14796
Genome accession: NC_015499
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 418957 - 419733 bp
Length : 777 bp
Strand : -
Note : COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: sku:Sulku_2743 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; IMG refe

DNA sequence :
ATGCTTAATTCAAGGATAGAAGAATACTGCATAAATCTAAAATTAAAGGGCATATTAGAAAACTATAGTTTTCTTGCAGA
TAAAGCAGCTAAAGAGAGTTTATCCTTTGCTGAATTCCTTTGTCTTCTGCTTGAAGCTGAATATGAAGCAAGAAATCAAA
GAGCAAAACAGACTATGCTGAAGTTTGCAGGTTTTCCAAAGATAAAAACTATAGACACCTTTGATTTTTCATCTTCATCA
GTTGATAAAACACTGATAAATGAAGTTCTATCAATGAGGTTTATTGATGAGACAAAAAACATTCTCCTTATTGGGCCTCC
TGGTGTAGGAAAAACTCATCTTGCTGTAGCTATAGGTTATGCTGCTACACAGAAGAGGATAAAGACAAAGTTCGTAACAA
TGGCTGATTTGATTATACAAATAGATACTGCACTATCTCAAAATAGACTGGAGCAATACATAAAGAAGTCTATAAATTTT
ACAGGGCTGCTTATTATTGATGAGTTTGGATACTTTAAGCTCAATGAGAAACAATCAAACCTACTGTTTCAGATAGTTAA
CAAGAAATATGAGACGGGCTCTATATTAATAACCACAAATCTTTCTTTTATCAGATGGAAAGAGATTTTCAACAATGATG
AAGGCTTAACTACAGCTATACTAGATAGACTTATTCATCACAGTTATATCATAAACATCAAGGGAGATAGTTATAGACTA
AGACAGAAGAGAAAGGCAGGATTAATTGACTTTAGTTCACAGGAAATTAACAGCTAA

Protein sequence :
MLNSRIEEYCINLKLKGILENYSFLADKAAKESLSFAEFLCLLLEAEYEARNQRAKQTMLKFAGFPKIKTIDTFDFSSSS
VDKTLINEVLSMRFIDETKNILLIGPPGVGKTHLAVAIGYAATQKRIKTKFVTMADLIIQIDTALSQNRLEQYIKKSINF
TGLLIIDEFGYFKLNEKQSNLLFQIVNKKYETGSILITTNLSFIRWKEIFNNDEGLTTAILDRLIHHSYIINIKGDSYRL
RQKRKAGLIDFSSQEINS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-45 45
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-45 45
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-45 45
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-45 45
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-45 45
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-45 45
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-45 45
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-45 45
unnamed CAA21402.1 - Not tested HPI Protein 3e-45 45
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-45 45
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-45 45
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-45 44
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thena_0408 YP_004437182.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 1e-45 45
Thena_0408 YP_004437182.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 1e-45 45
Thena_0408 YP_004437182.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 1e-45 45
Thena_0408 YP_004437182.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 1e-45 45
Thena_0408 YP_004437182.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 1e-39 41