Gene Information

Name : Thena_0334 (Thena_0334)
Accession : YP_004437111.1
Strain : Thermodesulfobium narugense DSM 14796
Genome accession: NC_015499
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 356477 - 358915 bp
Length : 2439 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489; KEGG: cya:CYA_0656 Clp protease, ATP-binding subunit ClpC; PFAM: ATPase associated with various cellular activities, AA

DNA sequence :
ATGTTTGAAAAGTTTACCGAAAAGGCAGCCAAGGCTATAATCCTTGCTCAGGAAGAAGCCAAGCGCTTAGGCCATAATTT
TGTCGGTACTGAACATATACTTTTAGGTCTCTTGGCTGAAGGAACAGGAATAGCTAACAAAGTTATCAATTCAATGGACA
TTGAACCTCAAGATATAAGACGTGAAGTAGAAAGGCTTATAGGCCGCGGCGGCGGCACACTTATATCAGAAATTCCTTTT
ACGCCAAGGGCAAAGAGAGTACTAGAGCTTTCCTGGGAGGAGGCAAGGCTCCTGGGACATAATCACATCGGTACTGAACA
CATCCTTCTAGGACTACTTCGAGAGGGAGAAGGAATAGGCGCAAGGGTCTTAAAATCTTTCAACATGGACATTGGAAAGG
TTAGAAGCCAAATCATCCAAATAATTTCGGGCGGTTCTGTAATAAAGAGTAAAGAGTCCGGACGTACACCTCTTTTGAAC
GAATTTGGAAGAGATCTTACAGCGTTAGCCCGAGAGAAAAAACTTGATCCTGTAATAGGTAGAGATAAAGAGATAAGAAG
ACTAATCCAAATAATGTGCAGAAGGACAAAAAATAATCCTGTACTTATAGGGGATCCTGGCGTTGGAAAGACAGCAATAG
TAGAAGGACTAGCACAAGCAATTGTAGACAACAACGTTCCACCAATGCTAAGAAAAAAGCGCCTGATCTCTCTTGATTTG
GGACTACTAATAGCTGGCACAAAATATCGCGGCGAGTTTGAAGATAGGCTAAAAAAGATAACCGAAGAGATAAAAAATGC
TGGCAACATAATACTCTTTATAGATGAATTACACACAATTGTCGGAGCAGGAGCAGCAGAAGGTGCAGTAGATGCGGCAA
ATATACTAAAACCCGCCCTTGCAAGGGGAGAAATCCAATGCATTGGAGCTACTACTGTAGAAGATTACAGGAAGCATCTT
GAAAAGGATGCAGGACTTGAAAGAAGGTTTCATCCAATACATGTAGAAGAACCTACTCAAGAGGAAGCTATCCAAATACT
TTTCGGCTTAAAAGAAAAGTACGAAGCACACCATGGAGTAAAAATTACTGAAGATGCAATAACTTCATCAGTTAAGCTTG
CCAAAAGATACATCTCCGATAGATTCTTGCCAGACAAGGCAATTGACATTCTTGATGAAGCCTCAGCAAAAGTTAAACTC
AAAGAGCCAGTAATGTCAGAAGCGTGGAAAGAACTTTATAAAAAATTGGAAAACGTTATTGAAGAAAAGGAAAACGTTAT
AAGGATGCAAGATTTTGAAAAAGCGGCAGTGTTGAGGGACAACGAACAAAAGATAAGAAACGAAATATCCAGTTTTACCA
ATCAGGAAGAAGTCAATGCTCTTGAAGTCAAAGTGGTGACAGAAGAGGACATAGCTGAAGTAGTTAGCGAGTGGACTGGT
ATTGAGCTAAAGAAGCTTACAGAATCTGAAATGAAAAAGTTATTAAACCTTGAAGAAGCCCTACACAAGAGGATTGTTTC
ACAACATGAAGCTGTTGTCTCAATTGCAAAAACTTTAAGAAGAACAAGAGCGGGGCTTCAAGATCCCAAAAAACCGCTGG
GCTCTTTCTTATTTTTGGGACCAACGGGCGTTGGGAAAACAGAACTTGCCAAAACGCTTGCAGAATATCTTTTTGGCAGC
GAAGAATCTCTCCTCAGATTTGATATGTCTGAATATATGGAAAAACATACTGTGTCACGACTAATCGGTGCTCCTCCTGG
TTATGTAGGATATACTGAGGGAGGCCAGTTAACAGATGCAGTTAGAAGAAGACCTTCATCAGTTATTTTGTTTGATGAAA
TAGAAAAAGCTCACCCAGATGTATTCAATCTCTTATTGCAAATTTTAGATGACGGAAGACTAACTGACGGCAAGGGCAGA
ACAGTTAACTTCAAGAATACTATACTTATAATGACTTCAAATTTAGGGACTCATATGCTTAAGGAAGGCTCCCCTGGTTT
TCTGGCAAGCTCTAATTCGCTTGATTATGAAAAGCTAAAGAGCCAAATCCAAAGAGAGTTAAAGGATACTTTTAGACCAG
AATTCTTAAATAGAATAGACGAAATAATCATTTTCAATTCTCTAACACAAGAAGATATGATAAACATTACCAAAAAGATG
CTAGAAAACGTAAAAGAAAAACTAAAAGTCAATCTAATAGACATAACCTTCTCAGAAAAAGTAGTTAATCAACTGGCAAA
GGAAGGATATGATCCAAAGTTTGGAGCTAGGCCTCTAAAGAGATTGATCCAAAAGAAAATTGAAGACCCAATTGCTGACA
AGATTATAGAGGGCTCAATCAAGCAGTGTGATTCTATAGAAGTTGACTTTGATTCGTGCGAATTTGTATTTAAAAATACT
CAAGAACTTGTATCAACGAGGAGCAGCAATAGCAAATAA

Protein sequence :
MFEKFTEKAAKAIILAQEEAKRLGHNFVGTEHILLGLLAEGTGIANKVINSMDIEPQDIRREVERLIGRGGGTLISEIPF
TPRAKRVLELSWEEARLLGHNHIGTEHILLGLLREGEGIGARVLKSFNMDIGKVRSQIIQIISGGSVIKSKESGRTPLLN
EFGRDLTALAREKKLDPVIGRDKEIRRLIQIMCRRTKNNPVLIGDPGVGKTAIVEGLAQAIVDNNVPPMLRKKRLISLDL
GLLIAGTKYRGEFEDRLKKITEEIKNAGNIILFIDELHTIVGAGAAEGAVDAANILKPALARGEIQCIGATTVEDYRKHL
EKDAGLERRFHPIHVEEPTQEEAIQILFGLKEKYEAHHGVKITEDAITSSVKLAKRYISDRFLPDKAIDILDEASAKVKL
KEPVMSEAWKELYKKLENVIEEKENVIRMQDFEKAAVLRDNEQKIRNEISSFTNQEEVNALEVKVVTEEDIAEVVSEWTG
IELKKLTESEMKKLLNLEEALHKRIVSQHEAVVSIAKTLRRTRAGLQDPKKPLGSFLFLGPTGVGKTELAKTLAEYLFGS
EESLLRFDMSEYMEKHTVSRLIGAPPGYVGYTEGGQLTDAVRRRPSSVILFDEIEKAHPDVFNLLLQILDDGRLTDGKGR
TVNFKNTILIMTSNLGTHMLKEGSPGFLASSNSLDYEKLKSQIQRELKDTFRPEFLNRIDEIIIFNSLTQEDMINITKKM
LENVKEKLKVNLIDITFSEKVVNQLAKEGYDPKFGARPLKRLIQKKIEDPIADKIIEGSIKQCDSIEVDFDSCEFVFKNT
QELVSTRSSNSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-174 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thena_0334 YP_004437111.1 ATPase AAA VFG0079 Protein 0.0 56
Thena_0334 YP_004437111.1 ATPase AAA VFG0080 Protein 5e-149 52