Gene Information

Name : Thena_0268 (Thena_0268)
Accession : YP_004437047.1
Strain : Thermodesulfobium narugense DSM 14796
Genome accession: NC_015499
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 286083 - 286508 bp
Length : 426 bp
Strand : +
Note : COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: amt:Amet_0033 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-strand binding protein; TIGRFAM: Single-strand DNA-binding; IM

DNA sequence :
ATGAGCAGGTTCAATAAGGTTATTCTGGTAGGTAGATTGGTTAAGGATCCAGAGCTTAGATACACTGCTGATGGCGTTCC
AGTGGCAAGCTTGACTATTGCTGTTAATAGAATTAACAGGAAAAATTCCACTGATCAAACAAATGCAGATTTTTTTAATA
TTGTTGCTTGGCGCTCTACTGCAGAGTTTGCTAGTAACTTTATGAGAAAGGGAATTCTCTTTCTTGTAGAGGGTAGATTG
CAAAATAGAAGTTATGAAACAAAGGAAGGCTCTAAGAGAACTGTTACCGAAATTATTGCGGACAGTATTCAGCTTTTGAG
CCCAAAGCAAGAAAATGCTCAGAAATCTGAGGTAGGCGAAGATACTACAGAGTTAGATGATTTTATCTTTGACGAGGATT
TTTCAAAAGGAGATTCTCCATTTTAA

Protein sequence :
MSRFNKVILVGRLVKDPELRYTADGVPVASLTIAVNRINRKNSTDQTNADFFNIVAWRSTAEFASNFMRKGILFLVEGRL
QNRSYETKEGSKRTVTEIIADSIQLLSPKQENAQKSEVGEDTTELDDFIFDEDFSKGDSPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 9e-20 55
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-19 53
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-20 52
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 7e-20 51
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-19 50
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-19 50
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 3e-19 45
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 6e-21 44
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 5e-21 44