Gene Information

Name : Thena_1644 (Thena_1644)
Accession : YP_004438385.1
Strain : Thermodesulfobium narugense DSM 14796
Genome accession: NC_015499
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 1692295 - 1693575 bp
Length : 1281 bp
Strand : -
Note : COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase; InterPro IPR002317:IPR015866:IPR002314; KEGG: gwc:GWCH70_0014 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class

DNA sequence :
ATGCTTGATATTAGGTTTTTAAGGGAAGATTTTGAAATTTTAAAGGACTCTTTAGCAAAAAGAGGGGTAAAATTAAACTT
TAGTCTTGATGATTTAAGGGAACTTGACTTGAAACTAAAAAATCTAAGAAATGAAATATCTAACCTTAGAGAGGCTCAAA
ATAAATTATCTAAAGAGATTTCAGTTCTTAAAAAGAATAAAGAAGATGCAACTGAGCTTGTTGAAAAATCTAGAAGTATA
GGAGATGAGATTTCGAAACTTGCAGAAAACGAGAGGGGTTTAGATTCTCAATTCAAAACCATGTGGTATCAACTGCCAAA
TATACTCTTGCCAGATGTACCGTTTGGTACTGATGAGACACAAAACGTTGTGGTTAATTATTTCGGTAAACCTAAAGAAT
TTGACTTTGAAATTTTGCCACACTGGGATTTGGGCAAAACACTTGGTTTACTTGATATTGAAAGGGCGGGAAAGGTTACT
GGGTCAAGGTTTTCCTTTCATGTAGGTTTGGGGGCAAGGCTTGTAAGAGCTCTGTTAAACTTTATGATGGATATGCACAG
ATCTGATGGTTTTGTTGAATTGTGGCCTCCATACCTTGTCAATGAAGCTTCGATGTATGGAACGGGACAGTTGCCAAAAT
TTAGGGATGAGCTTTTTAAATGTGCAGACGATCCGTATTTTCTTATACCTACCGCAGAGGTTCCTGTGACTAATTTTTTT
AGAGATGAAATTTTGTCTGATGATTCTTTACCGATAAGGTTTTGTGCATATTCGGCATGTTTTAGAAGAGAAGCAGGTTC
CTATGGAAAGGATGTTAGAGGGATAATTAGACAACATCAATTCGATAAGGTTGAGTTGGTTGTCTTTTGTAGACCAGAAG
ACTCTATGAACGAATTAAGCATTATAACCGAGCAAGCACAAAAAGTTTTAAAACAGCTAAAATTGCCATATAGAGTCATT
GAACTTTGTAGTGGAGATTTGGGTTTTGGTTCTGCTAAAACATATGATATTGAAGTATATATGGCATATTCTAAAAATTA
TAGAGAAATTTCTTCTTGTAGCAATTTTACTGACTTTCAAGCGAGAAGAGCAAATATACGCTATAAGCCCAAAGGTGGCA
AAACTAGGTATGTCCACACATTAAATGGTTCGGGTCTTGCAATTGGCAGAACTCTTGCAGCGATTTATGAATATTATCAG
GATAAAGATGGTTGTTTGATTGTACCAGATGTGCTGGTTCCTTATATTGGTATGGAGAGGATTGAGCCTAAAAAATGTTA
G

Protein sequence :
MLDIRFLREDFEILKDSLAKRGVKLNFSLDDLRELDLKLKNLRNEISNLREAQNKLSKEISVLKKNKEDATELVEKSRSI
GDEISKLAENERGLDSQFKTMWYQLPNILLPDVPFGTDETQNVVVNYFGKPKEFDFEILPHWDLGKTLGLLDIERAGKVT
GSRFSFHVGLGARLVRALLNFMMDMHRSDGFVELWPPYLVNEASMYGTGQLPKFRDELFKCADDPYFLIPTAEVPVTNFF
RDEILSDDSLPIRFCAYSACFRREAGSYGKDVRGIIRQHQFDKVELVVFCRPEDSMNELSIITEQAQKVLKQLKLPYRVI
ELCSGDLGFGSAKTYDIEVYMAYSKNYREISSCSNFTDFQARRANIRYKPKGGKTRYVHTLNGSGLAIGRTLAAIYEYYQ
DKDGCLIVPDVLVPYIGMERIEPKKC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 2e-96 51