Gene Information

Name : Thena_0966 (Thena_0966)
Accession : YP_004437726.1
Strain : Thermodesulfobium narugense DSM 14796
Genome accession: NC_015499
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 964815 - 965540 bp
Length : 726 bp
Strand : -
Note : COGs: COG0689 RNase PH; HAMAP: ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381:IPR001247:IPR015847; KEGG: ddf:DEFDS_0446 tRNA nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2;

DNA sequence :
ATTAGACTTGATAAGTCAAGAAAAAATGATGAATTAAGACATATTGAAATTATTAAGGATTTTTTAATCTATCCTGAAGG
GAGTGTTTTGATCTCTTTTGGTAATACTAAAGTTATTTGTAATGCTTCTGTCGAGGATAAAGTTCCACCTTTTTTAAAAG
GTTCTGGCAGCGGATGGATTACTAGTGAGTATAGTATGATACCTCGAGCTACACAAGATAGAAATGTTAGAGAGAGCACT
TCTGGTAAAATTTCTGGCAGAAATCAAGAAATTCAAAGGATAATAGGCAGATCACTAAGAAGCGCTGTAGATCTAAGTCT
TCTTGGCGAAAGGACAATATATATAGATGCAGAAGTAATTCAAGCTGATGCAGGTACAAGATGTGCTAGTATAACAGGTG
GTTTTGTTGCTCTTGTACTTGCATTAAGAAAATTAAAAGAATATGGGTTAATAAAAACTAGTCCACTAAAATATTATGTA
GCAGCTGTTTCTGTTGCAGTTTTAAACGATGAAGTTATATTAGACCCAAACTTTGAAGAAGACGTGATTGCTGATGTAGA
TCTTAATATAATTGCTAACGAAAACAGAGAAATTATAGAAATTCAAGGAACTGCTGAGAAAAAACCATTTTCCAAAGAGA
AGTTGAACGAGATACTTTATATTGCTTATAGTGGGATAGAAAAGATAATAGCCATACAAAAGAAAGTATTAAAGCTTACA
CGTTAA

Protein sequence :
MRLDKSRKNDELRHIEIIKDFLIYPEGSVLISFGNTKVICNASVEDKVPPFLKGSGSGWITSEYSMIPRATQDRNVREST
SGKISGRNQEIQRIIGRSLRSAVDLSLLGERTIYIDAEVIQADAGTRCASITGGFVALVLALRKLKEYGLIKTSPLKYYV
AAVSVAVLNDEVILDPNFEEDVIADVDLNIIANENREIIEIQGTAEKKPFSKEKLNEILYIAYSGIEKIIAIQKKVLKLT
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-48 49