Gene Information

Name : Glaag_4527 (Glaag_4527)
Accession : YP_004436705.1
Strain :
Genome accession: NC_015498
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 258449 - 259126 bp
Length : 678 bp
Strand : +
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: amc:MADE_00315 probable two component response regulator transcription regulator protein; SMART: response regulator rece

DNA sequence :
ATGAAAATATTAGTCGTTGAAGACGAAACAAAAACTGGAGACTACATCAAACAAGGCCTTGCCGAATCGGGCTTTGTTGT
TGAGTTAGTTCGGACCGGCCTCGATGGCCATCACAAAGCCATGCTCGGTGAATATGAGTTGATCATCTTAGACGTCATGC
TGCCTGATATCGATGGTTGGAAAATATTGTCATCGTTACGAGAGTCTAACAATCATACACCGGTTCTTTTTCTTACTGCT
CGTGATCATGTGAATGACCGTGTTAAAGGTTTAGAGCTCGGCGCAGATGATTACTTAGTGAAGCCGTTTGCATTTGCTGA
GTTGCTAGCGCGTGTGCGTACGTTGATCCGCCGCGGCACGTCCGTGCCCAATAATATTTTACACATAGCCGATTTGGAGC
TCGACATTCCTTCGCGTATTGCCACGCGAAGTGGGCGCACAATAAACCTGACAACTAAAGAGTTCACCTTATTAGAATTA
ATGGTGAGACGCCAAGGCGAGGTATTGCCGCGTTCTCTTATTGCTTCGCAAGTATGGGATATGAATTTTGATAGCGATAC
CAATGTGATTGATGTCGCCATTCGCCGTCTTCGAGCAAAAATCGATGATGACTTTTCACTAAAGCTCATTCAGACTGTGC
GAGGGATGGGATATAAAATGTGCAGTAATGAATCTTAA

Protein sequence :
MKILVVEDETKTGDYIKQGLAESGFVVELVRTGLDGHHKAMLGEYELIILDVMLPDIDGWKILSSLRESNNHTPVLFLTA
RDHVNDRVKGLELGADDYLVKPFAFAELLARVRTLIRRGTSVPNNILHIADLELDIPSRIATRSGRTINLTTKEFTLLEL
MVRRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDDFSLKLIQTVRGMGYKMCSNES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-58 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-58 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family BAC0111 Protein 3e-71 66
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family BAC0083 Protein 4e-70 65
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family BAC0308 Protein 2e-66 65
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family BAC0197 Protein 1e-68 65
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family BAC0638 Protein 5e-63 63
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family BAC0125 Protein 4e-64 62
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family BAC0347 Protein 8e-64 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family VFG0596 Protein 4e-59 57
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family VFG1390 Protein 1e-38 41
Glaag_4527 YP_004436705.1 two component heavy metal response transcriptional regulator, winged helix family VFG1389 Protein 9e-34 41