Gene Information

Name : Glaag_0902 (Glaag_0902)
Accession : YP_004433132.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 1057125 - 1058882 bp
Length : 1758 bp
Strand : +
Note : KEGG: pat:Patl_3456 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein

DNA sequence :
ATGAGCCAAGCCTTCATATTACGAGATTACCAAACGCAAGCGGTCGACGCCGCCTTAGCGCATTTTCGGCAAAGCGAAGA
CCCTGCAGTGATTGTACTGCCCACCGGGGCAGGTAAAAGCTTAGTCATTTCCGAGTTGAGTCGATTAGCAAAAGGCCATG
TTATTTGCCTTGCTCATGTCAAAGAGTTAGTGGAGCAAAATCACGCTAAGTTTCTGGCTACCGGCTCAGCAGCAGGTATC
TTTTCAGCAGGGTTAGGCCAAAAAGACAGCAACGTAAAAACCACCTTCGCCAGTATTCAGTCACTGTCTGCAAACTTAGC
AGCTTTTAATGTCCCGGCCAGCCTAATTATTATTGATGAATGCCACCGTGTGGGGCTAGAGGATAGTGCGCAATACAATA
AAACCTTGGCACATTTTCGCAGCTTGAATCCAAAGGTAAAAATTCTTGGATTAACCGCTACCCCTTACCGGTTAGGGAGC
GGCTGGATTTATCAGCATCATTATCATGGCTATACACGGCCCTCGGTCGATTCATTTTTCAAAAAATGTATTTTTGAGCT
CCCTTTACAGTACATGGTCAAAAACCAATATTTAACACCGCCCATACATTATGATGCTGCCGTTGCTCACTATGACTTTA
GTTTGCTAACAGAAAGCTTAGACGGTGAGCAAAACACCGATGATATCGCCTTAAATGAGCTCATTCATAAACACCCGAGG
GTGACGAAGGCGGTCACTGAGCAAATACTGCAGCTTAGTCAAGACCGCGAAGGCGTAATGATTTTTGCCGCCACTGTTGA
TCACGCAAAAGAGATCTGCGCTTATTTACCCGAACAACAAACCGCCTTAATAACCGGTGCGACCAAAATAAAGCAACGTG
ACACCCTCATTGCCGCCTTTAAAGCCAAACACATTAAGTACCTAGTGAATGTTTCGGTATTAACCACGGGCTTTGATGCG
CCCCATGTGGATGTGATTGCAATTTTGCGACCTACCCAATCTATCAGTTTATTTCAACAAATCGTCGGGCGCGGCTTGCG
CCTCAGCCCTGGCAAGAAAGACTGTTTAGTGTTGGATTACACCAATAACGGGTACGATATTTTTCAACCTGAAATTGGCG
AGAAAAAGCCCACCCCAGACTCAATTGCGGTGCAAATTCATTGCCCTCAATGCGACTTTGCCAATGCATTTTGGGGACGA
AAAGACGCGCAAGGTCATATTCTTGAACATTTTGGCCGCCGCTGCCAAGGCTTGATTGACACCCCAAATGGTGAAACCCA
ATGCAACTATCGTTTTCGCTTTAAACACTGCCCCTATTGCAATCAAGAAAACGACATTGCTGCCAGAAAGTGCCAACACT
GCAATGAGAAGCTAATAGACCCCGATGACATATTACGCAAAGCGTTAAATTTAAATAATAATAAAGTACTGCGCTGCGCT
GCCATTACCCCTGTGATCAACTCAGCAGAAAAGAGTATAAAAATCACCTATCACGATGAAGATGGCCTGACATTATCAGA
AACCTTTCGCTTCAATTATAAAAAAGCCAGACAACGCTTTAACGATTTATTCGCACGAAGATTAGCCAGCGGTACCCAGT
CAATTCAGTTCGATTCACTTGATGAGCTGCAAAAGTTTTTGCCTTACCTGCCAGCGCCTGACTTTGTGATAGCCAAAAAG
CAAAAGCACCACTGGCAAGTTACCGAACGGTTGTTTGATTATCAGGGGCCTTATCGAAAGGCCAATACGCTTGGCTAG

Protein sequence :
MSQAFILRDYQTQAVDAALAHFRQSEDPAVIVLPTGAGKSLVISELSRLAKGHVICLAHVKELVEQNHAKFLATGSAAGI
FSAGLGQKDSNVKTTFASIQSLSANLAAFNVPASLIIIDECHRVGLEDSAQYNKTLAHFRSLNPKVKILGLTATPYRLGS
GWIYQHHYHGYTRPSVDSFFKKCIFELPLQYMVKNQYLTPPIHYDAAVAHYDFSLLTESLDGEQNTDDIALNELIHKHPR
VTKAVTEQILQLSQDREGVMIFAATVDHAKEICAYLPEQQTALITGATKIKQRDTLIAAFKAKHIKYLVNVSVLTTGFDA
PHVDVIAILRPTQSISLFQQIVGRGLRLSPGKKDCLVLDYTNNGYDIFQPEIGEKKPTPDSIAVQIHCPQCDFANAFWGR
KDAQGHILEHFGRRCQGLIDTPNGETQCNYRFRFKHCPYCNQENDIAARKCQHCNEKLIDPDDILRKALNLNNNKVLRCA
AITPVINSAEKSIKITYHDEDGLTLSETFRFNYKKARQRFNDLFARRLASGTQSIQFDSLDELQKFLPYLPAPDFVIAKK
QKHHWQVTERLFDYQGPYRKANTLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01052 YP_001437156.1 hypothetical protein Not tested Not named Protein 3e-165 53