|
Name : Glaag_0890 (Glaag_0890) Accession : YP_004433121.1 Strain : Glaciecola sp. 4H-3-7+YE-5 Genome accession: NC_015497 Putative virulence/resistance : Unknown Product : Fis family NifA subfamily transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3604 EC number : - Position : 1043074 - 1044663 bp Length : 1590 bp Strand : - Note : KEGG: pat:Patl_3475 anaerobic nitric oxide reductase transcription regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein DNA sequence : ATGCCAGAGCTCAACTCAACCCTGTTATTAGAAGTGGCGCTAGATCTTGCCAATAGCATTACCAACGAAGATCGTTTTGA CAGATTGCTGTCCTCTATTCGAAAGGCGATTAACTGTGAGGCGGTGGTATTATTAGTGAATCGGGGCGAACAGCTGACGC CCTTAGCCACCCAAGGGTTAGCCCCTGATACACTAGGGCGACGTTTTAAGCTCAGTGATCACCCTCGCTTGGCGCTAATA TGCGCAGCAACTCAGCCTGTGCGATTTCCCTCTGACTCCCCGTTGGCAGATCCCTACGATGGCTTACTACTAGCAAAAGA CGGAGATTTACCTGTGCATTCATGTATGGGGTTACCTTTGTATAGCGATAATAAGCTGATAGGAGTGGTAACCCTAGATA GCTTAAGACCGAACGCATTCAATGATATTTCAGATCGAACCTTGCAGCTGATCTCAGCCCTGTCGGCAGCCACTTTAAAA ACAGCTATACAGTTAAAAGCGTTAGAACAAAGAGCACAGCAAGCACAGGATTTACTTCAAGAGTTAACCCATGAAGCACT AACACGAGACGGGGGAGAGCTCATAGGCAATAGCCCAAGCATGCAGGCTTTGAAAAGTGAAATTCAGTTAGTCGCTAGTT CAGATTATACCGTGCTCGTTTTAGGTGAAACCGGTGTGGGGAAAGAGTTAGTCGCAAGAACTTTGCACCGCTGCTCTGAG CGCAGTAACCATCCTCTGATTCACTTAAACTGTGCATCAATCCCTGAAACATTGGCTGAAAGCGAATTATTTGGCCATGC AAAAGGAGCATTTAGTGGTGCTGAAAAAGAACGGCCAGGGAAATTTCAATTAGCCGATGGAGGAACGATCTTCTTAGATG AAGTAGGTGAACTGCCATTGAGTGTGCAAGGTAAGCTATTGCGTGTGCTACAAAGCGGTGAAATACAGCCTGTGGGCAAA GATCAGGTGTCTATGGTCAACGTGCGGGTAATCGCTGCGACTAACCGAGATCTTGCTGAAGAGGTAAAAGTCGGTCGTTT TCGAGCCGATCTTTACCACCGTCTTTCGGTTTATCCTGTTCGTATTCCTAGCTTAAAAGAACGCAATAACGACATACTAT TACTTGCAGGTTACTTTCTAGAAGTCACCGCTCGCAAACTCGGGGTGCGCCAACTAAAAATTCGCCCTGATGTTGAAAAT GCCCTACTGGAATATACATGGCCAGGCAACGTGCGCGAGCTTGAGCATGTGATTAGCCGCGCATCACTAAAAGCAACACG TCATGCACAACAACAAGATATTATTTCGATTTCATTAGCCGATTTAGACTTTGAAACTGGTTTAGCGCAGCCCCCACAAT TAAAGCCCAAAGAGGCATTAGTAACGCACCTTAAGGAGCAAATCCCCTTAAAATCCCTGACTGAAGATTTTCAGCGGCAA TATATTTCAGACGCCCTTGTCGTGCACCACGGAAATTGGACCAACGCGGCAAAACAGTTAGGAATGGACCGAGCTAACTT AGCCCGTTTAGCGAAAAGACTAGGTGTTAGTTTAGAAAAACACATTAAACAGCAAACGCGCTTCTTGTAA Protein sequence : MPELNSTLLLEVALDLANSITNEDRFDRLLSSIRKAINCEAVVLLVNRGEQLTPLATQGLAPDTLGRRFKLSDHPRLALI CAATQPVRFPSDSPLADPYDGLLLAKDGDLPVHSCMGLPLYSDNKLIGVVTLDSLRPNAFNDISDRTLQLISALSAATLK TAIQLKALEQRAQQAQDLLQELTHEALTRDGGELIGNSPSMQALKSEIQLVASSDYTVLVLGETGVGKELVARTLHRCSE RSNHPLIHLNCASIPETLAESELFGHAKGAFSGAEKERPGKFQLADGGTIFLDEVGELPLSVQGKLLRVLQSGEIQPVGK DQVSMVNVRVIAATNRDLAEEVKVGRFRADLYHRLSVYPVRIPSLKERNNDILLLAGYFLEVTARKLGVRQLKIRPDVEN ALLEYTWPGNVRELEHVISRASLKATRHAQQQDIISISLADLDFETGLAQPPQLKPKEALVTHLKEQIPLKSLTEDFQRQ YISDALVVHHGNWTNAAKQLGMDRANLARLAKRLGVSLEKHIKQQTRFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| norR | ABD94719.1 | putative nitric oxide reductase transcriptional regulator | Not tested | ExoU island B | Protein | 4e-113 | 49 |
