Gene Information

Name : Glaag_0444 (Glaag_0444)
Accession : YP_004432676.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 491679 - 493784 bp
Length : 2106 bp
Strand : +
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: pat:Patl_0353 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase doma

DNA sequence :
ATGCGCGGACATGCGATGCTCGGACATTCGATGCGCGGACTAGCTCAAACGCCAGTCACCCAGTTAAAAGGGGTGGGTAG
CAAAGTAGCTGAAAAGCTCGAGAAGCTGGGGCTGCACAGTGTGCAAGACTTGTTGTTTCACTTGCCTCATCGCTATGAAG
ATCGCACCCGTATATATCCTATCGCTGATTTAATGCCGCACCTGCACACCAGTGTTGAAGGCGAAGTGATGTCCTGTGAC
GTGCAATTTGGTCGCAAGCGTATGCTGATTGTGCGCATGAGTGATAGCACAGGAACCATTACCTTACGCTTTTTTCATTT
TTCAGCGGCGCAAAAAAACAGCTTAGAGAAAGGCACGCACATTCGCTGTTTCGGTGAGGTGCGAGCGGGCAAGTATGGTT
TAGAGATCATGCACCCAGAATATAAAATCATCAGCACAGATTCCAGTGTTCAACTGGCTGAATCGTTAACGCCGGTTTAC
CCCTCCACCGAGGGCGTGAAGCAAGTTACTTTACGTAATTTGACCGAGCAGGCGCTTGGTTTACTTGATAAAGGTGGTTT
AGCTGAATTGCTGCCAAACGATGTATACCAGCAACAAGTGGGCTTGATTGAAGCATTGCATTTGGTTCACCGGCCACCGC
CGGATGTCACACTCGCCTTATTAGAAGAGGGCAAGCACCCAGCTCAGCAACGCTTAGCCTTAGAAGAGCTGCTGGCACAT
CATTTAAGCGTGCTTAAAGTACGTCAGCAAAGTCAGCAACAAAAAGGTTTTGCTATCACCCCAAGCAACCCCCTGTTAAC
GCAGTTACTCGATAGTTTGCCCTTTGATTTAACCGGTGCTCAGCAACGTGTTATTCAAGATATTCAGCAAGACATGCAGC
GTCCCACACCCATGATGCGCTTAGTGCAAGGGGATGTGGGCTCAGGCAAAACTTTGGTGGCAGCAATGGCTGCGTTATCG
GCCATTAGTGCTGGTTATCAAGTGGTGATGATGGCGCCCACTGAACTACTTGCAGAGCAGCACATGAACAACTTTCAAGG
CTGGTTTGCCCCATTAGGCATTGAAGTAGGTTGGTTAGCGGGTAAGTTAAAAGGCAAAGCACGTAATGAAACTCTTGAAA
ATTTAGCCAGTGGCAAGCTGCAATTGTTAGTGGGCACCCATGCGGTGTTCCAAGAAGCAGTGCAGTACCAGTCTTTAGCA
TTGGTGATTGTGGATGAGCAGCATAGATTCGGGGTACATCAGCGTTTGGCCTTGCGTGAAAAAGGCTTACAGCAAGACGC
ATTTCCTCATCAGTTGATCATGACCGCGACGCCTATTCCGCGGACATTGGCGATGACAGCCTATGCGGATTTAGATACCT
CAGTGATTGACGAGCTACCGCCTGGGCGCACACCTATCACCACAGTTGTATTACCAGAAACGCGGCGGGTTGATGTGGTG
GAGCGGGTACGCCTAGCAACGGTTGAGCACGGCAGGCAAACCTATTGGGTATGTACTTTGATTGAAGAATCCGAAGTGCT
GCAATCCCAAGCGGCAGAAGAAACCGCCATAGCCTTAGCGACAGCGCTGCCTGAGTTAAAAGTAGGCCTGGTACACGGGC
GGCTAAAAGCCGATGAAAAGCAGCGCTTAATGGAGCAGTTTAAAGCGGGTGAAATGGATTTACTCGTTGCCACTACGGTT
ATTGAAGTGGGTGTGGATGTGCCTAATGCGAGTTTGATGATCATTGAAAATCCCGAACGTTTGGGGCTGGCTCAACTACA
TCAATTACGCGGGCGAGTAGGGCGAGGCTCTGTAGAAAGCCACTGCGTGTTGATGTACCAAAGCCCGCTAACAAAAGTAG
CAGCGAAACGACTAGCGGTATTGCGTGAATCACACGACGGTTTCTATATCGCTCAACAAGACTTAGAAATACGCGGCCCA
GGTGAGTTGCTGGGCACCAAGCAAACGGGGTTGGCCGATCTGCGTATCGCGGATTTAGTCCGTGACGCAGCGCTAATACC
ACAGGTTCAAACGTTGTCAGTACAGTTATGGGAGCATCACTCAGCCAACGCACAAGCCATTATCAACCGCTGGCTGGGAG
ACAAAGAGCATTATGGTCATGCCTAA

Protein sequence :
MRGHAMLGHSMRGLAQTPVTQLKGVGSKVAEKLEKLGLHSVQDLLFHLPHRYEDRTRIYPIADLMPHLHTSVEGEVMSCD
VQFGRKRMLIVRMSDSTGTITLRFFHFSAAQKNSLEKGTHIRCFGEVRAGKYGLEIMHPEYKIISTDSSVQLAESLTPVY
PSTEGVKQVTLRNLTEQALGLLDKGGLAELLPNDVYQQQVGLIEALHLVHRPPPDVTLALLEEGKHPAQQRLALEELLAH
HLSVLKVRQQSQQQKGFAITPSNPLLTQLLDSLPFDLTGAQQRVIQDIQQDMQRPTPMMRLVQGDVGSGKTLVAAMAALS
AISAGYQVVMMAPTELLAEQHMNNFQGWFAPLGIEVGWLAGKLKGKARNETLENLASGKLQLLVGTHAVFQEAVQYQSLA
LVIVDEQHRFGVHQRLALREKGLQQDAFPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPITTVVLPETRRVDVV
ERVRLATVEHGRQTYWVCTLIEESEVLQSQAAEETAIALATALPELKVGLVHGRLKADEKQRLMEQFKAGEMDLLVATTV
IEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSVESHCVLMYQSPLTKVAAKRLAVLRESHDGFYIAQQDLEIRGP
GELLGTKQTGLADLRIADLVRDAALIPQVQTLSVQLWEHHSANAQAIINRWLGDKEHYGHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-90 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_0444 YP_004432676.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 58