Gene Information

Name : Glaag_0433 (Glaag_0433)
Accession : YP_004432665.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 482629 - 483558 bp
Length : 930 bp
Strand : -
Note : KEGG: pat:Patl_0342 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence :
ATGTCAGATCGCGTTATTCGAATTGCTACGCGCAAAAGTACTTTAGCCATGTGGCAAGCAGAATATGTTCAAGCCAAATT
GCTTGAAGCTCACCCTCAACTTAAGGTTGAATTGGTGCCAATGTCCACACAAGGTGACCGCATTTTAGATACTCCATTGG
CCAAAATCGGCGGCAAGGGGCTGTTTATCAAGGAGCTTGAAATCGCCATGAGCGAAGGCCGCGCAGATATAGCCGTACAC
TCAATGAAAGATGTTCCGGTGGATTTTCCAGATGGCTTTGGCCTGCACTGCATATGTGAGCGTGAAAACCCATATGACGC
CTTCGTCTCTAATACGTATTCTGCGATTGAAGAATTACCCCAAGGCGCAGTGGTAGGTACTTCGAGCTTACGCCGTCAGT
GCCAAATTCGTAGCGCTCGCCCCGACCTAACCATTCGCGATTTGCGTGGCAACGTAAATACCCGTTTAGCCAAGTTAGAT
GAAGGCCAATACGATGCCATTATTCTAGCTGCCGCTGGCCTCATTCGTTTGAATATGCAAGAGCGGATCAAAGCATACAT
AGAGCCTACAGTGTCTTTACCCGCTGTAGGCCAAGGCGCTGTTGGCATTGAATGCCGCAATGACGATGCAGAACTAATCG
AATTGCTCAAGCCATTGAATCACGCAGATACAGAATCAAGAGTTAAGGCCGAACGCGCCATGAATGCCAAGTTAAATGGT
GGTTGCCAAGTACCTATTGGTAGCTACGCGGTATTAAACGGTGACGAATTGTATTTACGCGGATTAGTGGGCTCACCTGA
TGGCAGTTTGCTTCTGCAAGCCGAAAAACGTGGCAGTATCAACGATGCGCAAAGTATTGGTATCGATGTCGCTGAGCAAC
TGCTTGAAAAAGGTGCGGGTGACATTCTTCAAGCGTTATACAAAGACTAA

Protein sequence :
MSDRVIRIATRKSTLAMWQAEYVQAKLLEAHPQLKVELVPMSTQGDRILDTPLAKIGGKGLFIKELEIAMSEGRADIAVH
SMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEELPQGAVVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLD
EGQYDAIILAAAGLIRLNMQERIKAYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKLNG
GCQVPIGSYAVLNGDELYLRGLVGSPDGSLLLQAEKRGSINDAQSIGIDVAEQLLEKGAGDILQALYKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-83 63
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-83 63