Gene Information

Name : Glaag_3851 (Glaag_3851)
Accession : YP_004436046.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4544438 - 4544650 bp
Length : 213 bp
Strand : +
Note : KEGG: pat:Patl_3871 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence : 
GTGGCCAATGTTCCCATTAAAAATAAAATCCGCGAACTGCGTTTTTTTGCTGATGAAATGACGCAAAAAGAGCTAGCAGA
ACTGGTCGGTGTCACACGACAAACGATCATGGCGATTGAAAAAAGTAAGTATTCACCAACGTTAGAAGTTGCCTTTAAAA
TCGCAGAAGTTTTTGGTCAATCATTAGAAGAGGTATTTCAATATGAAGGGTAG

Protein sequence : 
MANVPIKNKIRELRFFADEMTQKELAELVGVTRQTIMAIEKSKYSPTLEVAFKIAEVFGQSLEEVFQYEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-07 46
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-08 43
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-08 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_3851 YP_004436046.1 XRE family transcriptional regulator VFG2168 Protein 9e-09 43
Glaag_3851 YP_004436046.1 XRE family transcriptional regulator VFG2175 Protein 9e-09 43