Gene Information

Name : Glaag_3382 (Glaag_3382)
Accession : YP_004435584.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Virulence
Product : type I glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3960389 - 3961798 bp
Length : 1410 bp
Strand : -
Note : KEGG: pat:Patl_1025 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp

DNA sequence : 
ATGTCAGTAGAAAAGGCTTTACAGTTTATTAAAGAAAACGAAGCTAAATTTGTAGATTTGCGCTTTACGGACACTAAAGG
TAAAGAGCAGCATATCTCAATTCCATCTCATCAAGTTGATGAAGACTTCTTTGAAGAAGGAAAGATGTTTGACGGTTCGT
CAATTGCTGGTTGGAAAGGCATTAACGAATCTGACATGGTATTGATGCCAGATACAGAAACATTGGTAGTGGACCCTTTC
GCTGAAGAAACTCAAGTTAATATCCGTTGTGACATTCTTGAGCCAAACACAATGCAAGGTTACGATCGTGACCCACGCTC
TGTAGCAAACCGTGCTGAAGAATACCTTAAATCAACCGGTATTGGTGACAAAGTATTGTTTGGCCCTGAACCAGAGTTCT
TCTTATTCGACGACGTTCGTTTCCACACAGATATGGCTGGTTCTTTCTTCAAAATTGACTCTTCTGAAGCCAAGTGGAAC
TCAGGTGCTGAGTTTGAAGAAGGCAATATGGCCCACCGTCCAGGTGTGAAAGGCGGTTACTTCCCAGTACCTCCAGTTGA
TTCATCACACGATACCCGTGCCGCTATGTGTATGGTAATGGAAGAGATGGGTTTAACTGTAGAAGCACATCACCATGAAG
TGGCGACTGCTGGTCAAAACGAAATTGCATGTCTTTTTAACACACTTGTTAAGAAAGCCGATGAAATCCAAATTTATAAG
TATGTAGTGCACAATGTTGCTCATGCATACGGTCAAACAGCGACCTTTATGCCTAAGCCACTTGTTGGCGACAACGGTTC
AGGTATGCATTGTCACCAATCAATTTCTAAAGATGGCAAAAACATCTTCGCTGGTGATAAATATGCTGGTATGTCTGAAG
AAGCCTTGTTCTACATTGGCGGTATTATCAAGCATGCTCGTGCGATCAATGCATTTGCTAACGCTTCAACTAACTCGTAC
AAGCGTCTAGTTCCTGGTTTCGAAGCGCCAGTAATGCTTGCTTACTCAGCGCGTAACCGTTCTGCTTCTATTCGTATTCC
ACATGTGAACAGCGAAAAAGCACGTCGTATCGAAGTACGTTTCCCTGATCCAACTGCTAACCCTTACCTAGCATTCTCAG
CTATGTTGATGGCTGGCCTTGATGGAATCAAAAACAAGATTCACCCTGGCGATGCTATGGACAAAGATCTATATGATCTA
CCTCCTGAAGAAGCGGCAGAAATCCCAACGGTTGCGACTTCTCTAGAAGAAGCACTTGCTGCACTTGATGGTGACCGTGA
GTTCTTGACTGCTGGTGGCGTAATGAGTGACGACATGATTGACGCGTACATCGCTCTTAAATCACAAGAGGTTGAACTAT
TAAATACATCAGTTCATCCTGTTGAATTTGATATGTACTACAGCGTATAA

Protein sequence : 
MSVEKALQFIKENEAKFVDLRFTDTKGKEQHISIPSHQVDEDFFEEGKMFDGSSIAGWKGINESDMVLMPDTETLVVDPF
AEETQVNIRCDILEPNTMQGYDRDPRSVANRAEEYLKSTGIGDKVLFGPEPEFFLFDDVRFHTDMAGSFFKIDSSEAKWN
SGAEFEEGNMAHRPGVKGGYFPVPPVDSSHDTRAAMCMVMEEMGLTVEAHHHEVATAGQNEIACLFNTLVKKADEIQIYK
YVVHNVAHAYGQTATFMPKPLVGDNGSGMHCHQSISKDGKNIFAGDKYAGMSEEALFYIGGIIKHARAINAFANASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPHVNSEKARRIEVRFPDPTANPYLAFSAMLMAGLDGIKNKIHPGDAMDKDLYDL
PPEEAAEIPTVATSLEEALAALDGDREFLTAGGVMSDDMIDAYIALKSQEVELLNTSVHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-103 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_3382 YP_004435584.1 type I glutamine synthetase VFG1399 Protein 1e-112 50