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Name : Glaag_3034 (Glaag_3034) Accession : YP_004435236.1 Strain : Glaciecola sp. 4H-3-7+YE-5 Genome accession: NC_015497 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3538908 - 3540461 bp Length : 1554 bp Strand : - Note : KEGG: pat:Patl_1361 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGACTGAACAGCAACAAGATGAAAACAAGCTCATAGCTGAGCGCCGGACTAAACTTTCGCAGATCCGTGAAAACTGCAA ATCGAACGGCTTCCCTAATACCTTTCGTCGTGAATTTTATAGCCAAGATCTTCAAGCAGAGTTTGGAGAACATGAAAAAG CGGCTTTAGAAGAACTTGGTAAAGTGGTCAGTATTGCTGGGCGTATACTTGCTAAGCGCGGGCCATTCTTGTTATTGCAA GATATGACAGGTCGTATTCAAGCGTATGCCTCAAAAGACACGCAAAAAGACATTAAAGCCCGTTACACCAGTCTCGATAT TGGTGACATCATTGGTGTTAAAGGTGAACTTCATAAGTCAGGTAAAGGCGATTTGTACGTCAACATGAGCGAATACCAAT TGTTGACTAAGTCTTTGCGCCCATTGCCTGAAAAGTTCCATGGCCTAGCTGACCAAGAAACCAAGTACCGCCAGCGTTAT GTTGACCTGATTACGAATCAACAAACCCGTGATACGTTCATGATCCGCAGTAAAATTGTAACGGGTATTCGTAACTTCTT AAGTGAGCGTAAGTTCATGGAAGTAGAAACACCTATGTTGCAGGTAATTCCCGGCGGCGCAACGGCCAAACCGTTTACCA CGCACCATAACGCATTAGACATTGATATGTATTTGCGGATCGCCCCAGAGCTTTACCTTAAGCGTTTGGTGGTAGGTGGT TTTGAACGCGTATTTGAAATTAACCGTAACTTCCGTAACGAAGGGTTATCGACGCGTCACAACCCAGAATTCACTATGCT TGAGTTTTATCAGGCCTATGCTGATTATCAAGACTTGATGAACCTAACGGAAGAAATGCTGCGCAGCGTTGCACAAGACG TGTTAGGTACGAGCATTGTGAAGAACACTATCAAGGATAGCGAAGGTAACGTAGTCGAAGAGAAAACTTACGACTTTGGC CAACCTTTCCAGCGTTTGACCATGAGCGAAGCGGTGATCAAATATTGGCCTGAAGCGAACGTTGAAGCGATCAACGATCC TGAAGCGCATCTTGATGAGCTTAAAGCGATGGCCAAGCAGCTACACATCAAAGAGCCTGAAGTAGATGGCATATGGGGAG CAGGTAAGTACCTTTGTGAAATCTTTGAAGCCACAGCAGAAGAGCAACTTGATCAGCCTACATTCATTACTGCATACCCG TGGGAAGTATCACCACTGGCGCGCCGCAACGACGACAATAGTTTCGTGACCGACCGTTTCGAGTTTTTCGTAGGCGGTCG TGAACTGGCAAATGGTTTCTCTGAGTTAAATGACTCAGAAGACCAAGAAGCGCGTTTCCGTAAGCAGGTAGCTGAAAAAG ACGCGGGCGATGATGAAGCGATGCATTTTGACGATGACTATATTCGTGCCCTTGAATACGGTCTGCCGCCAACAGCAGGT GAGGGGATCGGTATTGACCGTTTGGTGATGTTATTCACTGACAGCCCTACGATTAAAGACGTCATCCTATTCCCGCACAT GAAGCCAGAAGTTAGCAGCGAGAAAGCTGAATAA Protein sequence : MTEQQQDENKLIAERRTKLSQIRENCKSNGFPNTFRREFYSQDLQAEFGEHEKAALEELGKVVSIAGRILAKRGPFLLLQ DMTGRIQAYASKDTQKDIKARYTSLDIGDIIGVKGELHKSGKGDLYVNMSEYQLLTKSLRPLPEKFHGLADQETKYRQRY VDLITNQQTRDTFMIRSKIVTGIRNFLSERKFMEVETPMLQVIPGGATAKPFTTHHNALDIDMYLRIAPELYLKRLVVGG FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYQDLMNLTEEMLRSVAQDVLGTSIVKNTIKDSEGNVVEEKTYDFG QPFQRLTMSEAVIKYWPEANVEAINDPEAHLDELKAMAKQLHIKEPEVDGIWGAGKYLCEIFEATAEEQLDQPTFITAYP WEVSPLARRNDDNSFVTDRFEFFVGGRELANGFSELNDSEDQEARFRKQVAEKDAGDDEAMHFDDDYIRALEYGLPPTAG EGIGIDRLVMLFTDSPTIKDVILFPHMKPEVSSEKAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-130 | 55 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-82 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Glaag_3034 | YP_004435236.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-131 | 55 |
