Gene Information

Name : Glaag_2500 (Glaag_2500)
Accession : YP_004434710.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, LuxR family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2939730 - 2940374 bp
Length : 645 bp
Strand : -
Note : KEGG: pat:Patl_2450 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence : 
TTGATAAAAATATTGTTGGTTGATGACCATGAGTTGGTCAGAACCGGAATAAGACGTATTTTGGAAGATGTACAAGGTTT
TGTCGTAGTTGGAGAAGCTACAACGGGTGAAGAAGCAGTAAAGTTTTGCCGCAAAAATGCACCCGATTTGGTACTAATGG
ATATGAGTATGCCTGGCATTGGTGGTTTGGAAGCGACCAAGCAGATCTTGCGTTTTAGTGAGAACACACGTGTTATTGTG
TTATCGGTTCACAAAGAAAACCCTATCCCAGCGAAAGTGATGCGAATGGGCGCGTTCGGTTATTTAACGAAAGATTCAGA
TCCTAATGAAATGGAGATGGCCATTCGTAAAGTGGCCGCAGGTCAAAAGTATGTATCGCCCGATATTGCACAGCAAATTG
CAATCGGCGCATTAGACTTTACTGATGGCAACCCTTTCGAATGCCTATCTGAACGAGAGCTTGAGATTACGCTAATGTTA
ACCAAGGGCTCTAAAGTGCCTGACATAGCCAAGTTCTTAAACATCAGTGCTAAAACGGTGAATACTCACAGGTATAGGAT
GTTTGAAAAACTCAATGTGAGTACAGATGTTGAACTCACTCATCTGGCACTTCGTCATAAGTTGATAAGCTCAGATAATT
TGTAA

Protein sequence : 
MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIGGLEATKQILRFSENTRVIV
LSVHKENPIPAKVMRMGAFGYLTKDSDPNEMEMAIRKVAAGQKYVSPDIAQQIAIGALDFTDGNPFECLSERELEITLML
TKGSKVPDIAKFLNISAKTVNTHRYRMFEKLNVSTDVELTHLALRHKLISSDNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-44 49
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-44 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_2500 YP_004434710.1 two component transcriptional regulator, LuxR family VFG1889 Protein 7e-53 50