Gene Information

Name : Glaag_2336 (Glaag_2336)
Accession : YP_004434549.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2732628 - 2733338 bp
Length : 711 bp
Strand : +
Note : KEGG: pat:Patl_2239 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGTTAACGATGAATAATATTGGTAAGGTCTTTACCACTGACGTGGTGCAAACCCACGCCTTAAGGGATTTTAGTTTACA
GGTAAATGAAGGTGACTTTTTAGCCGTAACAGGTACTTCTGGTTCGGGTAAAACAACATTTTTAAATGTGGCGGGGTTAT
TAGAAACCTTTGATAGCGGCCAGTACACGTTAGATGGCCAAGACATTCAAGGGCTAAATGATCGTGCCCGAAGCCAATTA
CGCAATGAAAAAATCGGCTTTATTTTTCAAAGTTTTAACCTTATTCCTGATCTAAATTTATTCGATAATGTAGATGTTCC
CCTGCGCTATCGTGGATTTAACGCAAGCCAACGAAAAGAACGTATCATCAACAGCTTAGAACGCGTTGGGCTTGGCAAGC
GTTTGAAGCACCTCCCTTCTCAACTATCAGGCGGGCAACAGCAGCGCGTCGCCATTGCCCGCGCATTAGCTGGCTCACCA
CGCTTTCTGCTGGCTGATGAGCCAACGGGCAACCTAGACAGCGATATGGCAAAGAGCGTGATGGCTTTGCTACAAGAAAT
CAATCAAAGCGGCACCACCATTATTATGGTCACCCACGATAAAACTCTGGCCGAACAAGCTCAGCGACAAATTATTGTAC
GCGACGGCAAGGTATGTGACTCAACGGGGCCTATCACCCGTTCGGAATCGGTTAGCGCAACCAATGTTTAA

Protein sequence : 
MLTMNNIGKVFTTDVVQTHALRDFSLQVNEGDFLAVTGTSGSGKTTFLNVAGLLETFDSGQYTLDGQDIQGLNDRARSQL
RNEKIGFIFQSFNLIPDLNLFDNVDVPLRYRGFNASQRKERIINSLERVGLGKRLKHLPSQLSGGQQQRVAIARALAGSP
RFLLADEPTGNLDSDMAKSVMALLQEINQSGTTIIMVTHDKTLAEQAQRQIIVRDGKVCDSTGPITRSESVSATNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_2336 YP_004434549.1 ABC transporter NC_008702.1.4606598. Protein 3e-44 46
Glaag_2336 YP_004434549.1 ABC transporter CP001581.1.gene798.p Protein 6e-36 45
Glaag_2336 YP_004434549.1 ABC transporter NC_012469.1.7686878. Protein 2e-51 44