Gene Information

Name : Glaag_2314 (Glaag_2314)
Accession : YP_004434527.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2702692 - 2704572 bp
Length : 1881 bp
Strand : -
Note : KEGG: pat:Patl_1931 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAATACGATCCTTTCGTCCAGTGAGGCAACTGCTAATTTAGCTAGCGCTTCTGACACCCAAAAAATTACACGCACCCC
ACTTCCTGCCAGTAAAAAAGTCTATGTGCCATCGCCCAATGACCCGAGTATTCGCGTGCCTATGCGTGAAATCAGTCTTA
CCGACGGCACAGCGGTTACTTTGTATGATACATCTGGCCCTTACACCGATGAAACGGTAGAGATAGACGTTAACAAAGGC
ATTGCCGACGTGCGAAGCCAGTGGGTGCTTGAACGTAACGACACTGAGCTATATCAAGGGCGAGAAGTACAACCCCAAGA
CAATGGTCACTTTGATCAAGACCGAGGTTTTCAGTATTACAACGACGATTTACAACGTACACCAAGGCGCGCCATAGCGG
GTAAAAATGTCAGTCAAATGCACTATGCTCGCAAGGGCATTATCACCAAAGAGATGGAGTACATTGCGGTACGCGAAAAT
CAAGCGCGAGAAGCGTTAAGCAATGAATTCACTACAGACGAGCGCAATAGTCGCTTAAAAGGTAACCCGTTAGGGGCGAA
CTTGCAGCCGATTACGCCGGAATTTGTGCGTAAAGAAGTGGCTGAGGGGCGAGCGATTATTCCCGCAAACATCAACCATA
CCGAACTTGAGCCAATGATAATCGGGCGCAACTTTCTGGTTAAAATCAATGGCAACATAGGTAACTCGGCGTTGCGCTCG
TCCATTGAAGAAGAAGTAGAGAAACTGGTCTGGTCAATACGCTGGGGCGGTGACACCATCATGGATTTGTCTACCGGTAA
AAACATTCACTCAACCCGGGATTACATCGTGCGCAACTCTCCTGTACCAGTAGGAACTGTGCCGATTTACCAAGCGCTTG
AAAAGGTCAAAGGGGTGGCTGAGGATCTTACGTGGGAGATCTTTCGTGACACCCTAATAGAGCAAGCAGAGCAGGGCGTA
GACTACTTTACGATCCATGCTGGAGTGCGCTTACATCATATTCCGATGACGGTAGATAGAGTCACAGGCATTGTATCTCG
TGGCGGGTCTATTATGGCTAAGTGGTGCATAGCCCATCACCAAGAAAGCTTTTTGTATACCCACTTTGAAGAGATTTGCC
ACATCATGAAGGCATACGATGTGAGCTTTTCTCTGGGTGATGGTTTACGTCCAGGCTCATTGGCTGATGCCAACGACGAA
GCACAATTTGCTGAGCTGATTACCCTAGGTGAGTTAACCAAGATAGCGTGGAAACACGACGTGCAAACCATGATCGAAGG
CCCAGGCCACGTACCCATGCACATGATCAAAGAAAATATGGACATGCAGTTGGAGCATTGCCACGAAGCGCCGTTTTATA
CGTTGGGGCCATTGACCACTGACATCGCTCCTGGATATGACCACATTACTAGCGGCATTGGCGCAGCGATTATCGGTTGG
TACGGCTGCGCTATGTTGTGTTATGTCACGCCTAAAGAGCACTTAGGCCTGCCGAACAAAGATGATGTAAAACAAGGGAT
CATGGCATATAAAATTGCAGCTCATGCAGCAGATATCGCTAAAGGTCACCCTGGAGCGCGTTATCGGGATGATCTATTGT
CAAAGGCGCGTTTCGAGTTTCGCTGGGTGGATCAGTTCAATCTTGGTTTAGACCCCGATACGGCAAGAGAGTACCACGAT
GAAACCTTGCCTAAAGACGCGGCGAAAGTGGCACATTTTTGCTCTATGTGTGGGCCTAAATTCTGCTCGATGAAAATATC
CCAAGTAGTACTCGACTATTCTGCCGATCTGAAAAGCGCAGAAATTGAAGCGGGCATGGCAAAAAAATCAGCCGAGTTTG
CTGCGGCTGGAGCGCAGATCTACGTAGCACAATCGGAGTAA

Protein sequence :
MNTILSSSEATANLASASDTQKITRTPLPASKKVYVPSPNDPSIRVPMREISLTDGTAVTLYDTSGPYTDETVEIDVNKG
IADVRSQWVLERNDTELYQGREVQPQDNGHFDQDRGFQYYNDDLQRTPRRAIAGKNVSQMHYARKGIITKEMEYIAVREN
QAREALSNEFTTDERNSRLKGNPLGANLQPITPEFVRKEVAEGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALRS
SIEEEVEKLVWSIRWGGDTIMDLSTGKNIHSTRDYIVRNSPVPVGTVPIYQALEKVKGVAEDLTWEIFRDTLIEQAEQGV
DYFTIHAGVRLHHIPMTVDRVTGIVSRGGSIMAKWCIAHHQESFLYTHFEEICHIMKAYDVSFSLGDGLRPGSLADANDE
AQFAELITLGELTKIAWKHDVQTMIEGPGHVPMHMIKENMDMQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAIIGW
YGCAMLCYVTPKEHLGLPNKDDVKQGIMAYKIAAHAADIAKGHPGARYRDDLLSKARFEFRWVDQFNLGLDPDTAREYHD
ETLPKDAAKVAHFCSMCGPKFCSMKISQVVLDYSADLKSAEIEAGMAKKSAEFAAAGAQIYVAQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 63