Gene Information

Name : Glaag_2234 (Glaag_2234)
Accession : YP_004434447.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Unknown
Product : class I and II aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 2600089 - 2601318 bp
Length : 1230 bp
Strand : +
Note : PFAM: aminotransferase class I and II; KEGG: pat:Patl_2034 aminotransferase AlaT

DNA sequence :
ATGCGTACTTTTAACAAATCTAGAAAACTCGATAATGTGTGTTACGACATTCGTGGCCCAATATTAGAACAAGCACAGAA
AATGGAAGATGAAGGTCACCGTATTTTAAAGCTAAATATTGGTAACCCTGCTCCCTTTGGTTTTGAGGCGCCCGATGACA
TTTTGAAGGATGTGATACATCATCTGCCTAAATCACAAGGTTATTCTGAGTCAAAAGGGATCTACCCTGCCCGTGTTGCT
GTCATGCAGTATTATCAGCAACAGCAAATCAAAAATATCTCAGTAAATGACATATACATAGGTAATGGCGTAAGTGAATT
GATAGTAATGGCAATGCAAGCCTTGCTTGATGATGGTGATGAAGTACTGTTGCCTAGCCCAGATTACCCCCTTTGGACGG
CATCCGTTAGTCTGTCATCAGGTAATCCCGTGCATTATCGGTGTGACGAAAATTCGGGCTGGGAGCCTGATATTGATGAC
ATCAGAAGTAAGATCACTGTTAACACAAAAGCCTTAGTACTTATCAATCCAAATAATCCAACTGGGGCGGTTTACAGTAA
AGCACTGCTATTACAAATAGTTGAGCTCGCTCGCGAGCACGGCTTAATGGTATTTAGTGATGAAATTTATGACAAGATCC
TTTATGACGGCGCGCAGCATCAATGTATTGCCGCCCTCGCTGATGACATATTTTTTATCACTCTTGGCGGCTTATCGAAA
AACTATCGTATTGCAGGCTTCCGTGCAGGTTGGTTAGTGGTCAGTGGTCAAAAGGCGCTAGGCAGCAATTACATCGATGG
CTTAAACATGCTCTCATCGATGCGTATGTGCGCTAACGTACCTAGCCAACACGCAATTCAAACTGCCTTAGGCGGCTATC
AAAGCATCAATGATTTAATTGCCGACGGTGGGCGTTTAAAACAGCAAAGAGACCTTGCCACAGCCCTACTCAATGAAATT
GATGGGCTTGAATGCGTCGCTCCTAAAGGTGCAATGTACTGTTTCGTTAAAGTAGATGCACAGAAATTTAATATTACCAG
TGATGAGCAAATGATCATGGACTTGCTGCGCAGCGAAAAGGTGCTGCTTGTGCACGGCAAGGCATTTAATTTAACCGACG
GCTGTTACTTTCGTTTAGTCTTCTTACCTCACATTGATGTGCTGCGCCCAGCCATTGAACGTATCGCCAATTTCTTTAAA
CACTACCGTCAGGCAGATCCTACATTATGA

Protein sequence :
MRTFNKSRKLDNVCYDIRGPILEQAQKMEDEGHRILKLNIGNPAPFGFEAPDDILKDVIHHLPKSQGYSESKGIYPARVA
VMQYYQQQQIKNISVNDIYIGNGVSELIVMAMQALLDDGDEVLLPSPDYPLWTASVSLSSGNPVHYRCDENSGWEPDIDD
IRSKITVNTKALVLINPNNPTGAVYSKALLLQIVELAREHGLMVFSDEIYDKILYDGAQHQCIAALADDIFFITLGGLSK
NYRIAGFRAGWLVVSGQKALGSNYIDGLNMLSSMRMCANVPSQHAIQTALGGYQSINDLIADGGRLKQQRDLATALLNEI
DGLECVAPKGAMYCFVKVDAQKFNITSDEQMIMDLLRSEKVLLVHGKAFNLTDGCYFRLVFLPHIDVLRPAIERIANFFK
HYRQADPTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-115 57
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-115 57
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-115 57
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-115 57