Gene Information

Name : Glaag_0148 (Glaag_0148)
Accession : YP_004432385.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Virulence
Product : general secretion pathway protein I
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 175007 - 175402 bp
Length : 396 bp
Strand : +
Note : KEGG: pat:Patl_0236 general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J

DNA sequence :
ATGAAGCTACCCTCTATTGCTCGTCAACACAAAGGAATGACCTTACTGGAAGTGATGGTCGCTTTGGTGATATTTGCCAT
GACAGCGACCGCCATTATGAAAGCGGCCAGTGACCATTTAAGCAGTATTGGGCAGATAGAAGAAATTACCTTCGCGACTT
GGGTAGCGAATAATCGCTTAACCCAGCTGCAGCTCTCAACAACATGGCCACCAAAGAACAACGCTAAGGGTGAACAAGAA
ATGTCTGAGCGTACGTGGTTTTGGCGTCAAACTGTGAGCAAAACCAATGATAGTGAATTGATGTCAGTGGAAGTCAGTGT
GGCATTAGACGCTGCGTTTTCTGCGCCAATCACCTCTGTGACGACGTTTGTGGCTAAACGAGATTCAGATGTCTAA

Protein sequence :
MKLPSIARQHKGMTLLEVMVALVIFAMTATAIMKAASDHLSSIGQIEEITFATWVANNRLTQLQLSTTWPPKNNAKGEQE
MSERTWFWRQTVSKTNDSELMSVEVSVALDAAFSAPITSVTTFVAKRDSDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-08 42
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 1e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_0148 YP_004432385.1 general secretion pathway protein I VFG0178 Protein 4e-16 42
Glaag_0148 YP_004432385.1 general secretion pathway protein I VFG2052 Protein 5e-09 41