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Name : Glaag_1460 (Glaag_1460) Accession : YP_004433687.1 Strain : Glaciecola sp. 4H-3-7+YE-5 Genome accession: NC_015497 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1689387 - 1690673 bp Length : 1287 bp Strand : - Note : KEGG: pat:Patl_2863 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit DNA sequence : ATGTCTATCAGTTATTTTTGGGTTTTTATATTGTTGCTCACCGCGGGTACGCCCGTGGTATTCGCTCTGTTGATTGGCCC AGGTGTGAGCTTGATGCTAGATGGCAACGAGGTATTTTTCTCTGCCCTACTAACGCGCTTATATTCGGGAATGAATTCAT TTCCCTTGATGGCTGTGCCTTTTTTCATCTTAGCCGGCGAGTTGATGAACCAAGGTGGCATCACGCAATCCATTGTACGC TTTAGCCAAACCTTAATCGGTCATTACCGGGGTGGGTTAGCCCAAGTCAATATTTTATCCTCAGTGCTATTCGCTGGTTT GTCTGGCTCTGCGGTCGCTGATACCTCAGCGTTGGGTAAAATGCTCATTCCGGCTATGGAAGAAAACGGCTACAGCAGAC GCTTTGCTGCAGCCGTCACCGCTGCATCATCCGTCATTGGCCCCATTATTCCCCCTTCTGGGATCATGATTTTGTACGCA TTTATCATGAATGTCTCTGTGGCTGGTATGTTCTTAGCTGGCATTACCCCAGGCTTACTCATTTGTGCTGGCTTGATGTT TGTTACCAGCCGCATTGCCAAAAAGCGTAATTATCCAGTAGCCAATCAAAAGGCGACTTGGTATGAGCGCGGCAGCGCCC TTAAAACCTCTTTTTTACCTCTGCTGACCCCGGTTATTTTACTTGGTGGTATCGTACTAGGTGTATTTACCCCCACTGAA GCTGCTGCCGCTGCGGCGGGTTATGCACTGATTATTACCTTGTTTGTCACCAATACCCTCACGTTTGGCAAGTTACCGCA CATATTGGTTAACGCGGCGGTGCAATCAGGCACTATTTTACTATTGGTTGGCTCAGCCGTTACCTTTGCGTGGATCATTA CCGTCTCAGGCATGGCCGACATGCTTGCAGAGCAGATAGTTGGCATTACTGATAACGTTTTACTGTTATTACTTATTATC AACTTGTTCTTATTCGCTATCGGTATGTTTTTAGATGCAGGCCCAGCGATATTAATCCTCGGACCTGTGTTAGCGCCTAT TTTTATCTCACTGGGCATCGACCCACTGCATTTTGCCGTGATCATGTGCGTGAACTTAACTGTGGGTCTCGCCACGCCGC CCATGGGCTTGGTTCTGTTTGTGGCGGCGTCCGTATCGGGTGAAAAAACCGAGAACATTGCCTATGAAATGCTGCCGTTT TTAGCAGTAGAAGCCTTGGTGATCTTCATCATAACCTATTTTCCAGCGGTCACTATGACCCTACCTCGCCTGTTTGGGTT TGCTTAA Protein sequence : MSISYFWVFILLLTAGTPVVFALLIGPGVSLMLDGNEVFFSALLTRLYSGMNSFPLMAVPFFILAGELMNQGGITQSIVR FSQTLIGHYRGGLAQVNILSSVLFAGLSGSAVADTSALGKMLIPAMEENGYSRRFAAAVTAASSVIGPIIPPSGIMILYA FIMNVSVAGMFLAGITPGLLICAGLMFVTSRIAKKRNYPVANQKATWYERGSALKTSFLPLLTPVILLGGIVLGVFTPTE AAAAAAGYALIITLFVTNTLTFGKLPHILVNAAVQSGTILLLVGSAVTFAWIITVSGMADMLAEQIVGITDNVLLLLLII NLFLFAIGMFLDAGPAILILGPVLAPIFISLGIDPLHFAVIMCVNLTVGLATPPMGLVLFVAASVSGEKTENIAYEMLPF LAVEALVIFIITYFPAVTMTLPRLFGFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 4e-56 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 4e-56 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 3e-56 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Glaag_1460 | YP_004433687.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 1e-56 | 42 |
