Gene Information

Name : Glaag_1413 (Glaag_1413)
Accession : YP_004433641.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1638674 - 1639399 bp
Length : 726 bp
Strand : +
Note : KEGG: pat:Patl_2913 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATTAAAACGTCCGCGATCACAAAAACGGTTACTACCTCTCAAGGTGAACTTGCAATCCTCAAGCCAATTAGTTTTGA
AGTCAAGGCAGGTGAGTCGATTGCCATCGTGGGTGCGTCAGGCTCCGGTAAATCGACATTGTTGAGTCTACTTGCGGGGC
TTGATGAAGTAAGCAGCGGAGATATTTATCTTGACGGGCAAGCCTTGCATGAAATGAACGAAGAGCAGCGGGCACAATTA
CGCGGTGAGAAAGTTGGCTTTATTTTTCAAAGCTTCATGTTGGTCCAAAGTTTAACAGCGATTGAAAATATTATGTTACC
TGCAGAAATTGCGGGGTTGGATAACGCCAAACAACTTGGCCAAGAAATTCTAGATAAAGTCGGCTTAGGGCATCGTGGCG
ATCATTATCCTAATCAGCTATCCGGTGGCGAGCAGCAGCGAGTGGCCATTGCGCGAGCGTTTATTACTAAACCGAAAATC
TTGTTTGCTGATGAACCAACCGGCAATTTAGATGCCGCCAATAGTGACAAAATTGAACAGTTGTTGTTCGATTTGAATCG
CGACTCCCATACAACCTTGGTACTTGTAACGCATGATAATGAGTTGGCGAAACACTGCCAACGTCAATTATTAATGAATG
CAGGGGAACTTAGCGAAGTCACTATATCAGATGATAATGCTGGCTCAGGGCAAAAATCAGTGATTTCGCAAAGTCAGGTA
GGGTAG

Protein sequence : 
MIKTSAITKTVTTSQGELAILKPISFEVKAGESIAIVGASGSGKSTLLSLLAGLDEVSSGDIYLDGQALHEMNEEQRAQL
RGEKVGFIFQSFMLVQSLTAIENIMLPAEIAGLDNAKQLGQEILDKVGLGHRGDHYPNQLSGGEQQRVAIARAFITKPKI
LFADEPTGNLDAANSDKIEQLLFDLNRDSHTTLVLVTHDNELAKHCQRQLLMNAGELSEVTISDDNAGSGQKSVISQSQV
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_1413 YP_004433641.1 ABC transporter NC_012469.1.7686878. Protein 3e-37 45
Glaag_1413 YP_004433641.1 ABC transporter NC_008702.1.4606598. Protein 3e-32 45
Glaag_1413 YP_004433641.1 ABC transporter CP001581.1.gene598.p Protein 2e-22 44