|
Name : Glaag_1090 (Glaag_1090) Accession : YP_004433319.1 Strain : Glaciecola sp. 4H-3-7+YE-5 Genome accession: NC_015497 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1284559 - 1287222 bp Length : 2664 bp Strand : - Note : TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: pat:Patl_3263 DNA mismatch repair protein MutS; SMART: DNA mismatch repair pro DNA sequence : ATGCCAAAAACGAACACATCAGCATCAACAACCTCTTCATCTTTGCAACAGCATACTCCCATGATGCAGCAATATTTGAA AATTAAAGCTGAGCATCCTGATATCCTGTTATTTTATCGTATGGGTGATTTTTACGAACTCTTTTTTGACGATGCTAAAA AGGCCTCTGAACTACTGGATATTTCCCTCACGGCACGAGGAAAATCTGGCGGTAACGCTATTCCTATGGCGGGCGTGCCC TATCATGCGGTGGAAAACTATCTAGCGCGCTTGGTGAAGATGGGTCAATCGGTGGCCATCGTTGAACAAGTAGGCGATCC GGCTACTAGTAAAGGCCCTGTCGAGCGTAAGGTACAACGTATCGTCACACCGGGCACGGTATCAGACGAAGCACTGCTTA ATGACAAACAAGACAACATCTTAGCCGCCGTTTTTTGCCCTGTACAAAAAAGCAACCAAGCATTGGTATTTGGCTACGCA ACCTTAGATGTGACCAGCGGACGCTTCACTTTGTGTGAACTTAGCGGAGAAGAAGCTCTAGCAGCTGAGCTTCAACGTAC GAATCCAGTTGAGCTTTTATACCCAGACGACTTTGCTTTCAGTCATTTAATTGATCAGCGCAAAGGGCTACGTCGCCGCC CTCAGTGGGAATTTGACTTACAAACCGCTACCAGCCAGCTTACCAGCCAATTCGGTACTAACGAATTATCGGGTTTCGGC GTGCAGAATCATCAAATCGGTATATGCGCCGCGGGCTGCGTAATGCAATATATTAAAGATACTCAGCGCTCTGCATTACC TCATATTGACCGAATTGTGCTCGAAGCTCACAACGACACAGTCGTGATGGATGCAGCCACTAGGCGCAACCTTGAACTTA CACTAAACCTATCTGGCGGCACTGAAAATACGCTGGCAAGTATACTGGATAAAACCTCGACACCTATGGGCAGCCGTTTA TTGCAACGCTGGATCCACAGGCCACTAACTGACGTAACCGTGCTAAAAATGCGCCAACGTAATATCCAAGGTTTAATAGA GTCTCCCTATCCCCAATTACAAGACACCCTGAAAAAAATGGGTGACATGCAGCGTGTACTGGCGCGCTTAGCTTTGCGCA GTGCTCGCCCCCGTGACTTCGCGCGTTTGCGCCAAGCATTCGCGCTATTGCCTGATATCCAACACTACCTAGAGCATGAA GTTAGTCATCTTGATAATGACTCGCAGCAATGTGGCTTATCTCAATTAGCACAACAAATCTTCCAATACCCCGACTTCGC CGATCTATTAGAGCGTGCGGTCATTGACACGCCACCGGTATTGATCCGAGATGGTGGCGTCATTAAAGAAGGCTACAACG AAGAGCTGGATCATCTGCGTGCCCTGTCAAAAGGGGCTACTGATTATTTAGAAGAATTAGAACAGCGGGAAAAAGAGCGC ACCGGCATCGCCAGCCTGAAAGTCGGTTACAACCGCGTGCATGGCTACTTTATTGAAGTCAGTCGCAGTCAATCGGATTT AGTGCCCGTTGAGTATGTTCGTCGCCAAACACTCAAAAATAATGAACGCTATATTATTCCGGAGCTAAAAGAGCACGAAG ACAATGTGCTTAGCAGCCAAAGCCGCTCATTAGCGCTTGAGAAAAAACTATACGATGAGCTTTTCGATATACTCTTACCC CAATTAACACAGCTAATGCAAAGTGCTGATGCGTTAGCAGAATTGGATGTGCTAGCAAATTTGGCCGAACGTGCCGAAAG CTTAGATTACCACTGCCCTGATTTATGCCCACAAAGCGGTATTCATTTTAGCCAGGGCCGTCACCCTGTGGTTGAACAAG TATCAGATGCTCCCTTTATTGCCAATCCCATTGAGGTCAACCCCAACCGCAGAATGTTGGTAATCACCGGGCCGAACATG GGCGGTAAATCAACCTATATGCGCCAAACAGCACTAATCGTATTGATGGCCTATATAGGTAGCTATATCCCCGCACAAGA CGCAAAAATAGGCCCTATCGACCGGATATTTACCCGCATAGGGGCGTCGGATGATTTAGCTTCAGGTCGCTCAACGTTTA TGGTCGAGATGACCGAAACGGCCAACATTTTGAATAATGCAACCGCAAACAGCTTGGTTTTGATGGATGAGATTGGTCGA GGCACCAGCACCTATGACGGCCTGTCATTGGCTTGGGCTTGTGCTGAATACTTAGCCACTAAATTACAGTCGTTTACCCT TTTCGCCACGCACTATTTTGAATTAACAGGCTTGGCTGAAGCGCTTCCAGAGCTAGCTAATGTGCATTTAGATGCCGTCG AGCACGGCGATACCATTCGCTTTATGCATGCTGTACAAGATGGTGCTGCCAATAAAAGCTATGGCTTACAAGTAGCGCAA CTAGCTGGGGTGCCCAAACAAGTGGTGCAAGCAGCGAAACGCAAGTTACATGAACTTGAAACCGGCGCATCTGTGAAGAC ATCAGTAGCAAGGCCTGAAGCACAGCCTCAAGCCATTAAAGCGGAAGAAAAGGTGGAAACTCAATTAGATTTACTCGGGC AACCTAGTGAAGCAGAAGAATTACTTTACAGTATTCAACCGGATGATCTTACCCCCAAACAAGCGCTTGAATATTTGTAC CAATTAAAAAAGTTAGCAAGGTAG Protein sequence : MPKTNTSASTTSSSLQQHTPMMQQYLKIKAEHPDILLFYRMGDFYELFFDDAKKASELLDISLTARGKSGGNAIPMAGVP YHAVENYLARLVKMGQSVAIVEQVGDPATSKGPVERKVQRIVTPGTVSDEALLNDKQDNILAAVFCPVQKSNQALVFGYA TLDVTSGRFTLCELSGEEALAAELQRTNPVELLYPDDFAFSHLIDQRKGLRRRPQWEFDLQTATSQLTSQFGTNELSGFG VQNHQIGICAAGCVMQYIKDTQRSALPHIDRIVLEAHNDTVVMDAATRRNLELTLNLSGGTENTLASILDKTSTPMGSRL LQRWIHRPLTDVTVLKMRQRNIQGLIESPYPQLQDTLKKMGDMQRVLARLALRSARPRDFARLRQAFALLPDIQHYLEHE VSHLDNDSQQCGLSQLAQQIFQYPDFADLLERAVIDTPPVLIRDGGVIKEGYNEELDHLRALSKGATDYLEELEQREKER TGIASLKVGYNRVHGYFIEVSRSQSDLVPVEYVRRQTLKNNERYIIPELKEHEDNVLSSQSRSLALEKKLYDELFDILLP QLTQLMQSADALAELDVLANLAERAESLDYHCPDLCPQSGIHFSQGRHPVVEQVSDAPFIANPIEVNPNRRMLVITGPNM GGKSTYMRQTALIVLMAYIGSYIPAQDAKIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILNNATANSLVLMDEIGR GTSTYDGLSLAWACAEYLATKLQSFTLFATHYFELTGLAEALPELANVHLDAVEHGDTIRFMHAVQDGAANKSYGLQVAQ LAGVPKQVVQAAKRKLHELETGASVKTSVARPEAQPQAIKAEEKVETQLDLLGQPSEAEELLYSIQPDDLTPKQALEYLY QLKKLAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Glaag_1090 | YP_004433319.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 64 |
