Gene Information

Name : Glaag_1021 (Glaag_1021)
Accession : YP_004433250.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1201299 - 1203299 bp
Length : 2001 bp
Strand : +
Note : KEGG: pat:Patl_3330 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region

DNA sequence :
ATGCCTTCACGTCAACAACTCGCTAACGCAATACGTGCGCTTAGTATGGATGCAGTACAACAGGCTAATTCAGGACACCC
AGGCGCCCCTATGGGCATGGCAGATATAGCCGAAGTATTGTGGAACGATTTTTTAAAGCACAACCCTGCGAACCCAAATT
GGGCTAACCGTGACCGCTTTATTATGTCTAACGGCCATGGTTCGATGTTAGTTTATTCGTTGCTGCATTTAACGGGTTAT
GAATTACCGATTGAAGAGTTAAAGAATTTCCGTCAATTGCATTCAAAAACACCAGGTCACCCTGAGTATGGTTATGCGCC
TGGCGTAGAAACCACAACAGGCCCGTTAGGCCAAGGTATTAGCAATGCGGTTGGTATGGCGATAGCCGAGAAAGTATTGG
CGGCGCAATTTAATCAAGATAACTTCGATATTGTTGACCATTTCACTTATTGCTTCTTAGGCGATGGCTGTTTGATGGAA
GGTATCTCTCATGAAGCGTGCTCTCTGGCGGGTACGTTAGGCCTAGGCAAGTTGGTTGCGTTTTGGGATGACAATGGTAT
TTCTATTGATGGGCATGTAGAAGGCTGGTTTACGGATAATACGCCTGCGCGTTTTGAATCTTATGGTTGGCAGGTCATTG
CTGATGTTGATGGACACGATCCAGAAGCGATTAAAGCAGCGGTTGAAACAGCAAAAGCCAATACCACTCAGCCAACATTG
ATTTGCTGTAAAACGGTTATAGGTTTCGGTTCACCGAATAAATCAGGTAGCCATGACTCTCACGGCTCGCCTTTAGGGGT
TGATGAAATCACCGCTACCCGCGAATTTTTAAAATGGCCTCATGCTGCATTTGAAGTTCCAGAAGATATTTATGCAGGGT
GGGATGCAAAAGCATCAGGCTCTGAGTTAGAGCAAGCGTGGAATGAACAACTCGCGGCATACGAGAAAGCTCACCCAGAA
TTAGCGGCTGAATTAACGCGTCGTTTAAACGGTGATTTACCTGCTGATTTCGCAGAAAAAGCCCAAGCGTTCATCGAGCA
ATCTCAGGAAAAAGCGGAAAATGTGGCAAGTCGTAAGGCGTCACAAAATTCAATTGAAGCATTTGCTGCAATCATGCCGG
AAATTTTAGGGGGCTCAGCTGACTTAGCTGGTTCAAACTTAACCCTTTGGTCAAACTCTAAAGGCGTGACAGCTGACGAT
GCCAGCGGTAATTACTTATACTACGGTGTGCGTGAGTTCGGCATGAGCGGCATCATGAACGGTATCGGTTTGCATGGTGG
TTTCCGTCCATTTGGTGCGACCTTCCTTATGTTTATGGAGTATGCACGTAATGCGGTTCGTATGGCTTCATTGATGGGCA
TTCCTAATATCTTCGTGTATACCCATGACTCAATTGGTCAAGGTGAAGACGGCCCAACGCATCAGCCTATCGAGCAATTG
GCTAACTTGCGTTTAACCCCGAATCTCGCTACGTGGCGTCCTTGTGACGGGGCTGAAACCGCCGTTGCATGGAAATCAGC
TTTAGAGCGTAAAGATGGTCCAAGTGCCCTAGTCTTCAGTCGTCAAGGTTTGCCTGCTCAAGCGCGTAATGCTGAGCAAC
TAGCCAACGTGGCTAAAGGCGGCTACGTGCTAAAAGATTGCGAAGGTACACCTCAAGTTATCTTAATTGGTACGGGCTCT
GAAGTAGGTGTTGCCATGGAAGCCGCTGAGCAACTTAGCGCCAAAGGTGTTGCTGTGCGAGTTGTGTCTATGCCAAGTAC
TTCTGTGTTTGACCAGCAAGATGACAGCTATCGTGAATCAGTACTGCCAAGAGCAGTTACCGCTCGAGTAGCGGTTGAAG
CGGCTCATGTAGATTACTGGAGCAAGTATGTTGGTTTCGATGGTGCAGTAGTGGGCATGTCTACCTTTGGTGAGTCTGCA
CCAGGTGCGGCACTGCTTAAGCACTTCGGTATCACGGCTGATGCTGTGGCTGAGAAAGCACAAGGATTGTTGAATTGTTA
G

Protein sequence :
MPSRQQLANAIRALSMDAVQQANSGHPGAPMGMADIAEVLWNDFLKHNPANPNWANRDRFIMSNGHGSMLVYSLLHLTGY
ELPIEELKNFRQLHSKTPGHPEYGYAPGVETTTGPLGQGISNAVGMAIAEKVLAAQFNQDNFDIVDHFTYCFLGDGCLME
GISHEACSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDNTPARFESYGWQVIADVDGHDPEAIKAAVETAKANTTQPTL
ICCKTVIGFGSPNKSGSHDSHGSPLGVDEITATREFLKWPHAAFEVPEDIYAGWDAKASGSELEQAWNEQLAAYEKAHPE
LAAELTRRLNGDLPADFAEKAQAFIEQSQEKAENVASRKASQNSIEAFAAIMPEILGGSADLAGSNLTLWSNSKGVTADD
ASGNYLYYGVREFGMSGIMNGIGLHGGFRPFGATFLMFMEYARNAVRMASLMGIPNIFVYTHDSIGQGEDGPTHQPIEQL
ANLRLTPNLATWRPCDGAETAVAWKSALERKDGPSALVFSRQGLPAQARNAEQLANVAKGGYVLKDCEGTPQVILIGTGS
EVGVAMEAAEQLSAKGVAVRVVSMPSTSVFDQQDDSYRESVLPRAVTARVAVEAAHVDYWSKYVGFDGAVVGMSTFGESA
PGAALLKHFGITADAVAEKAQGLLNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 69
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 64