Gene Information

Name : Krodi_0527 (Krodi_0527)
Accession : YP_004429780.1
Strain : Krokinobacter sp. 4H-3-7-5
Genome accession: NC_015496
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 598500 - 599546 bp
Length : 1047 bp
Strand : +
Note : KEGG: cat:CA2559_00490 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter

DNA sequence :
ATGGCACCAAAGAAATTAAATTTTTTAGACAGAAATCTTACGTTATGGATTTTTGTGGCGATGGCTGTGGGCGTTGGCTT
GGGGTATTTTATTCCATCTTTTCCAGATGTCATAAACTCATTTAATAGCGGGACTACAAATATCCCCATTGCGATAGGAT
TAATATTAATGATGTATCCGCCGCTTGCCAAAGTGAATTATGCCTTGTTACCAAAGGTGTTTAAAAACACTAAGATATTG
TCTATTTCGCTATTACTTAACTGGATTGTAGGTCCAATATTGATGTTTGTGCTAGCGATTACATTCCTGAGAGACTATCC
TGAATATATGGTAGGGCTTATTTTAATAGGTCTTGCAAGATGCATCGCGATGGTATTAGTATGGAATGACCTCGCCGAAG
GAAGTAGCGAGTATGGTGCGGGACTTGTCGCTCTTAACAGCGTGTTCCAAGTATTTGCATATAGTTTTTATGCTTGGCTT
TTTATAACGGTGCTTCCACCCTATTTTGGTTTTGAAGGTGCAATCATAGATATCTCTATTGCAACCATAGCAGAGAGTGT
AGCCATTTATTTAGGGCTACCCTTTTTATTAGGTATCGCAAGCCGACTTATCTTAGTTAAACTAAAAGGAGAACATTGGT
ACACAAATACCTTTATTCCTACCATATCACCATTGACCTTAATTGCATTGCTTTTTACCATCATTGTGATGTTCTCACTT
AAAGGCGAACTCATTGTTCAAATACCGATGGATGTTGTTATTATCGCTATTCCAATGCTCATATACTTCACATTGATGTT
TATTATAGGATTCTTTGTGACCAAAGCAACTGGAGCAGATTATGACAAAACAACAGCTGTTGCTTTTACAGCAGCAGGAA
ATAACTTTGAACTTGCGATTGCCGTAGCAATTGCCGTATTTGGACTTAATTCTGGACAAGCATTTACGGGCGTTATTGGT
CCGCTAGTAGAGGTGCCTGCATTGATACTACTGGTGCGTGTATCTTTCTGGTTACGTAAAAAGTATTATAAGAAAGCGGC
GATGTAG

Protein sequence :
MAPKKLNFLDRNLTLWIFVAMAVGVGLGYFIPSFPDVINSFNSGTTNIPIAIGLILMMYPPLAKVNYALLPKVFKNTKIL
SISLLLNWIVGPILMFVLAITFLRDYPEYMVGLILIGLARCIAMVLVWNDLAEGSSEYGAGLVALNSVFQVFAYSFYAWL
FITVLPPYFGFEGAIIDISIATIAESVAIYLGLPFLLGIASRLILVKLKGEHWYTNTFIPTISPLTLIALLFTIIVMFSL
KGELIVQIPMDVVIIAIPMLIYFTLMFIIGFFVTKATGADYDKTTAVAFTAAGNNFELAIAVAIAVFGLNSGQAFTGVIG
PLVEVPALILLVRVSFWLRKKYYKKAAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 1e-106 64
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 2e-106 64
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 1e-83 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krodi_0527 YP_004429780.1 arsenical-resistance protein BAC0573 Protein 2e-106 62
Krodi_0527 YP_004429780.1 arsenical-resistance protein BAC0004 Protein 1e-75 50