Gene Information

Name : Krodi_0494 (Krodi_0494)
Accession : YP_004429748.1
Strain : Krokinobacter sp. 4H-3-7-5
Genome accession: NC_015496
Putative virulence/resistance : Unknown
Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0809
EC number : -
Position : 565213 - 566262 bp
Length : 1050 bp
Strand : -
Note : KEGG: cat:CA2559_07741 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein

DNA sequence :
ATGAAGTTATCACATTTTAACTTTGATTTGCCAGATGAATTACTAGCAGATCGCCCAGCCGAAAATCGCGACGAGTCACG
CCTTATGGTACTTAACCGAAAAGAGCAGACTATAGAGCACAAAATGTTTAAAGACATTATTGATTATTTTGAGCCGGAAG
ATGTGATGGTGCTTAATAATACCAAGGTTTTTCCAGCACGTTTATACGGTAATAAAGAAAAAACTGGAGCACGTATCGAG
GTATTCTTGCTTAGAGAACTTAACTCAGAAACACGCCTATGGGATGTTCTTGTAGATCCAGCACGTAAAATACGTATAGG
TAACAAGTTGTACTTTGGTGACGATGAGAGTCTAGTAGCAGAAGTAATTGATAACACAACATCAAGAGGACGTACACTTC
GTTTCTTATATGATGGATCTTACGAGGAGTTTAGAAAAAAGCTAACTTCACTAGGAGAGACGCCATTACCTAAATATATT
AATAGAGAGGTAGAGCCAGAAGATGAAGATCGCTACCAGACTATTTATGCAACAGAAGAAGGAGCTGTAGCCGCGCCTAC
TGCAGGTTTACACTTCTCAAAGCACTTGCTTAAGCGTCTTGAGATTAAAGGAGTAGACTTTGCTGAGGTTACACTACACG
TAGGTCTAGGAACTTTCAGCGCAGTTGAGGTAGAAGATCTATCTAAGCATAAAATGGATAGTGAAGAGGCATATATACAT
AAGCCAGCAACAGAAATTATCAATAAAGCGCTAAAGGAAAAACGTCGTATTTGTGCCGTAGGTACAACCTCGATGAGAGT
GATGGAAAGTGCTGTTTCTAGTAACCATACACTTAATGAGTTTGGTGGATGGACTAACAAATTCATCTTCCCTCCATACG
ACTTTAGTATCGCAAACTGTATGATTACAAACTTTCATACACCTAAGTCTACTTTGTTAATGATGGTTTCTGCATTTGCA
GGTCACGATTTTATGAAGAGAGCTTATGAAGAAGCAGTAAAAGAGAAATATAAATTCTACTCTTACGGAGACGCAATGTT
GATTATCTAA

Protein sequence :
MKLSHFNFDLPDELLADRPAENRDESRLMVLNRKEQTIEHKMFKDIIDYFEPEDVMVLNNTKVFPARLYGNKEKTGARIE
VFLLRELNSETRLWDVLVDPARKIRIGNKLYFGDDESLVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLTSLGETPLPKYI
NREVEPEDEDRYQTIYATEEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHVGLGTFSAVEVEDLSKHKMDSEEAYIH
KPATEIINKALKEKRRICAVGTTSMRVMESAVSSNHTLNEFGGWTNKFIFPPYDFSIANCMITNFHTPKSTLLMMVSAFA
GHDFMKRAYEEAVKEKYKFYSYGDAMLII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
queA AAT96106.1 QueA Not tested T-PAI Protein 6e-54 41
queA AAT96042.1 QueA Not tested T-PAI Protein 4e-54 41
queA AAT96070.1 QueA Not tested T-PAI Protein 3e-54 41
queA AAT96122.1 QueA Not tested T-PAI Protein 3e-56 41
queA AAT96182.1 QueA Not tested T-PAI Protein 1e-53 41
queA AAF71490.1 QueA Not tested Hrp PAI Protein 7e-54 41