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Name : Krodi_2744 (Krodi_2744) Accession : YP_004431987.1 Strain : Krokinobacter sp. 4H-3-7-5 Genome accession: NC_015496 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3103487 - 3106039 bp Length : 2553 bp Strand : + Note : KEGG: cat:CA2559_11148 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase DNA sequence : ATGGACGATAATTTTTCACCAAGAGTAAAAGATGTGATTGCTTATAGTAAGGAAGAGGCCTTAAGATTGGGTCATGACTT TATAGGCACGGAGCACTTACTACTTGGGTTATTAAGAGACGGAAGCGGTAAAGCAATCGATATTTTAGGAGCTTTAAACA TAGATTTAGAGCATTTAAGACGCAAGGTTGAGATACTAAGCCCAGCAAACCCCAATATGAATTTGCAGAGTAACGATAAG AAAAACTTACATCTTACTCGTCAGGCAGAGCGTGCACTAAAAACAACCTTTTTAGAAGCAAAGCTTTTTCAAAGTTCATC AATAAATACGGCTCATCTATTATTATGTGTACTACGTAATGAGAATGACCCTACTACAAAACTTCTTAATCGACTTAAAG TAGATTATGACAGTGTTAAAGACCAATTTAAATTAATGATGGCAAACGAAAGCGATGAATATATAGAGCCTATTAAGTCA GAATCTTTTAGTGATGATGGCGATAATAGTGATGAAGGATCTAAAGAAAATCCTTTTAATAGCCCTACAACGCCTAAAGG AGGAAAGAAAAGTAAAACTCCTGTTTTAGACAACTTTGGAAGAGATCTTACTGCGATGGCAGATGAGGGCAAACTTGATC CAGTAGTAGGACGCGAGAAAGAAATAGAGCGTGTATCTCAAATTTTGAGTAGACGCAAGAAAAATAATCCTCTTTTAATA GGAGAACCAGGAGTGGGTAAATCTGCTATTGCAGAAGGACTTGCTTTACGTATTGTGCAACGAAAGGTGTCTCGTATACT TTTTGACAAGCGTGTTGTTACTCTTGACCTTGCTAGTCTTGTAGCCGGAACAAAATACAGAGGACAGTTTGAGGAGCGCA TGAAGGCTGTAATGAATGAGCTTGAAAAGAATGATGATATTATTCTTTTTATTGACGAAATTCACACAATCGTAGGTGCA GGTGGAGCGACAGGATCTCTTGATGCATCAAATATGTTTAAACCAGCACTAGCTCGAGGCGAAATACAATGTGTAGGAGC GACTACGTTAGATGAATTCCGCCAGCATATTGAAAAAGACGGAGCTCTTGAGCGTCGTTTCCAAAAAGTTATTGTAGAAC CTACTTCTGTTGAAGAAACTATTGAAATTCTACAAAATATTAAAGGAAAGTACGAAGAGCACCACAACGTAACATATACG GATGAGGCTATCGAAGCTTGTGTAAAACTTACAAATAGATATATGACGGATAGGTTTCTCCCAGATAAAGCTATTGATGC TCTGGATGAGGCGGGATCTCGTGTCCACATCACAAATATTGATGTACCAAAGAAAATTCTAGAACTAGAAAATAAACTTG AAGAGGTAAGAGAACTCAAAACATCTGTTGTCAAAAAGCAGAAGTATGAAGAGGCTGCGAAGTTAAGAGATGACGAGAAA ACCTTAGAAAAGGAACTTGCAATCGCTCAAGAGCGCTGGGAAGAAGATGCAAAGCTTCATAAAGAAGAGGTATCTGAAGA TAATGTTGCAGATGTAGTGAGTATGATGACGGGAATCCCTGTTAATCGTATTGCACAAACAGAAAGCAACAAACTTGCCG AACTACCTGCTATCATTAAGAAAAATGTAATAGGTCAGGACGAAGCTGTTGCTAAAGTAGCTAAGGCCATACAACGTAAC AGAGCAGGATTGAAAGACCCAAATAAGCCTATAGGTTCATTTATTTTCTTAGGACAAACGGGTGTAGGTAAAACGCAACT AGCAAAAGTCCTTGCAAAGGAACTATTTGATAATCAAGATGCACTCATACGTATTGATATGAGTGAGTACATGGAGAAAT TCTCAATATCTAGATTAGTTGGAGCGCCTCCTGGATACGTAGGTTATGAAGAAGGTGGCCAACTTACAGAAAAAGTGCGT CGTAAGCCTTATGCTGTAGTACTTCTTGATGAAATAGAAAAAGCGCATCCAGATGTGTTCAACATGCTATTGCAAGTACT AGACGATGGTTTCTTAACAGATTCTTTAGGTCGTAAAATCGATTTTAGAAATACAATCATCATTATGACGTCTAATATAG GTGCAAGAAAACTCAAAGACTTTGGTCAGGGAGTTGGTTTTGGTACTGCTACTCGTAAAACTCAAGTAGACGATAATGCA AGAAGTATTATACAGAATGCACTTAAAAAAGCCTTTGCACCTGAGTTTTTAAATCGTGTAGACGATGTTGTGGTATTTAA CGCATTAGAGCGTGAGGATATTCATAGAATTATTGATATTGAACTTTCAAAATTATATACTAGAATCAAAGATTTAGGAT ATGACTTATCTCTTAGTGAAAAAGCTAAGGATTATATAAGTGATAAAGGATTTGATAAAGAATATGGCGCAAGACCACTT AAGAGAGCTATTCAAAAGTATATTGAAGACGCACTAGCTGAGGAGATAATTAATTCTCAACTAAAAGAAGGTGATAGCAT ATTTATGGACTTTGACGAGAAAAAAGAAGAATTAGTTATTGATATAAAAAAGATAGAAGCTACAGAATCGTAA Protein sequence : MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLLLGLLRDGSGKAIDILGALNIDLEHLRRKVEILSPANPNMNLQSNDK KNLHLTRQAERALKTTFLEAKLFQSSSINTAHLLLCVLRNENDPTTKLLNRLKVDYDSVKDQFKLMMANESDEYIEPIKS ESFSDDGDNSDEGSKENPFNSPTTPKGGKKSKTPVLDNFGRDLTAMADEGKLDPVVGREKEIERVSQILSRRKKNNPLLI GEPGVGKSAIAEGLALRIVQRKVSRILFDKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNDDIILFIDEIHTIVGA GGATGSLDASNMFKPALARGEIQCVGATTLDEFRQHIEKDGALERRFQKVIVEPTSVEETIEILQNIKGKYEEHHNVTYT DEAIEACVKLTNRYMTDRFLPDKAIDALDEAGSRVHITNIDVPKKILELENKLEEVRELKTSVVKKQKYEEAAKLRDDEK TLEKELAIAQERWEEDAKLHKEEVSEDNVADVVSMMTGIPVNRIAQTESNKLAELPAIIKKNVIGQDEAVAKVAKAIQRN RAGLKDPNKPIGSFIFLGQTGVGKTQLAKVLAKELFDNQDALIRIDMSEYMEKFSISRLVGAPPGYVGYEEGGQLTEKVR RKPYAVVLLDEIEKAHPDVFNMLLQVLDDGFLTDSLGRKIDFRNTIIIMTSNIGARKLKDFGQGVGFGTATRKTQVDDNA RSIIQNALKKAFAPEFLNRVDDVVVFNALEREDIHRIIDIELSKLYTRIKDLGYDLSLSEKAKDYISDKGFDKEYGARPL KRAIQKYIEDALAEEIINSQLKEGDSIFMDFDEKKEELVIDIKKIEATES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-177 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Krodi_2744 | YP_004431987.1 | ATPase AAA-2 domain-containing protein | VFG0080 | Protein | 2e-144 | 50 |
| Krodi_2744 | YP_004431987.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 49 |
