Gene Information

Name : Krodi_2654 (Krodi_2654)
Accession : YP_004431898.1
Strain : Krokinobacter sp. 4H-3-7-5
Genome accession: NC_015496
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2985436 - 2987295 bp
Length : 1860 bp
Strand : -
Note : KEGG: zpr:ZPR_0137 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAAAAATAGAGACACTGCGCCTAAGCAAGGCGGCATTACCCGAAATCCATTTCCTAATTCAAAAAAAATCTACGTAAA
CGGTAAGATTCACCCACAGATTAAAGTGGCTATGCGCGAGATTGCGCTTAGTGATACCGTGGATTCCATGACCAAAAAGA
AAACACCTAACGAGCCAGTAACGGTGTATGATACTTCTGGACCATATACAGATCCAAACAAGGAAATCGATATCCATAGC
GGTATAGAGCGCATACGTGAGTCGTGGATTTTGGAGCGCAATAATGTAGAACAATTAGACAGCTACTCCTCTACCTATTG
CAATGAGCGTCTTAATGATAAGAGTCTAGATCACATGCGTTTTAAGCTTTTAAAGAAACCTTTGCGTGCAAAAAAAGGTG
AAAATGTTACGCAGCTCCATTATGCAAAACAAGGAATTATCACTCCAGAAATGGAGTATATCGCTATTCGCGAAAATCAG
CGTATCGATGAGATGACGGAGATTAGAAAGCAACATAAAGGAGAACATTTTGGTGCGTCTATTCCTGATAAGATCACGCC
AGAATTTGTACGCTCAGAAGTTGCAAGAGGTCGTGCCGTAATTCCATCAAACATTAACCACCCAGAAGCAGAGCCTATGA
TTTTAGGACGTAATTTCTTGGTAAAGATCAATGCAAATATTGGAAACTCTGCAGTTACCTCGTCCATTGAGGAAGAAGTA
GAAAAAGCAGTATGGGCATGCCGCTGGGGAGCAGATAATATCATGGATTTATCTACTGGAGAAAACATACATGAAACACG
CGAGTGGATCATACGTAACTCCCCTGTTCCCGTGGGAACAGTTCCTATTTACCAAGCGTTAGAAAAAGTAAATGGCGTTG
CCGAAGATCTAACGTGGGAGATTTTTAAGGACACCTTAATTGAGCAAGCAGAGCAAGGCGTAGATTATTTTACCATACAC
GCTGGTGTGTTATTACGTTATGTGCCTATGACCGCAAATCGTGTGACGGGTATCGTCTCTCGTGGCGGATCTATCATGGC
AAAGTGGTGTCTTGCACATCATAAAGAAAGCTTTTTGTATACACATTTTGAAGATATCTGTGAGATTTTAAAACAATACG
ATGTCGCCTTTTCATTAGGTGACGGTTTGCGTCCAGGATCTGTAGCAGACGCAAATGATGAGGCACAATTTGCTGAGCTA
GAAACACTAGGCGAACTTACAAAAATCGCTCGTAAGCATGATGTGCAGTGTTTTATAGAAGGTCCTGGTCACGTGCCTAT
GCACATGATTAAGGAAAATATGGAGAAGCAAATCGAACTTTGCGATGAAGCTCCATTTTACACTTTAGGGCCGCTTACAA
CAGATATTGCGCCTGGATATGACCATATTACCTCTGGAATTGGTGCCGCTATGATAGGCTGGTACGGTTGTGCGATGTTA
TGCTACGTTACTCCAAAAGAACACCTTGGATTACCTAACAAGGAAGACGTGCGTGTTGGTGTAGTTACTTATAAACTTGC
TGCTCATGCTGCAGATCTGGCCAAAGGTCACCCTGGTTCACAACATCGAGATAATGCGCTGAGTATGGCACGTTTTGAAT
TTCGCTGGGAAGACCAGTTCAATCTTGGTCTCGATCCAGAGCGCGCTCGTGAGTATCACGATGAAACCTTACCAGCTGCA
GGAGCAAAAGTGGCTCACTTCTGCTCCATGTGCGGACCAAAATTCTGCTCCATGAAAATTTCTCAAGAAGTAAGAGATTT
TGCTGCTGTAAATGACATAGTTGATAACGAGGTCATTCAAAAAGGTATGGAAGAAAAATCTAAAGAATTTAAAGCCAAAG
GTTCCGAAGTATATCTGTAA

Protein sequence :
MKNRDTAPKQGGITRNPFPNSKKIYVNGKIHPQIKVAMREIALSDTVDSMTKKKTPNEPVTVYDTSGPYTDPNKEIDIHS
GIERIRESWILERNNVEQLDSYSSTYCNERLNDKSLDHMRFKLLKKPLRAKKGENVTQLHYAKQGIITPEMEYIAIRENQ
RIDEMTEIRKQHKGEHFGASIPDKITPEFVRSEVARGRAVIPSNINHPEAEPMILGRNFLVKINANIGNSAVTSSIEEEV
EKAVWACRWGADNIMDLSTGENIHETREWIIRNSPVPVGTVPIYQALEKVNGVAEDLTWEIFKDTLIEQAEQGVDYFTIH
AGVLLRYVPMTANRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEDICEILKQYDVAFSLGDGLRPGSVADANDEAQFAEL
ETLGELTKIARKHDVQCFIEGPGHVPMHMIKENMEKQIELCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAML
CYVTPKEHLGLPNKEDVRVGVVTYKLAAHAADLAKGHPGSQHRDNALSMARFEFRWEDQFNLGLDPERAREYHDETLPAA
GAKVAHFCSMCGPKFCSMKISQEVRDFAAVNDIVDNEVIQKGMEEKSKEFKAKGSEVYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 69