Gene Information

Name : Krodi_2041 (Krodi_2041)
Accession : YP_004431292.1
Strain : Krokinobacter sp. 4H-3-7-5
Genome accession: NC_015496
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2291661 - 2292353 bp
Length : 693 bp
Strand : -
Note : KEGG: cat:CA2559_12888 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGGCAACCTTATTAAAATTAGAAATATCATTCGTGACTTCCCATTAGGGACAGAGATTGTTCACGTACTCAAGGGTAT
AGACCTTGATATTGATAAGGGTGAGTATGTAGCTTTTATGGGACCTTCTGGTTCTGGAAAGTCTACGCTTATGAATCTTT
TAGGCTGCCTTGACACACCTACCGCTGGATCATATGTTCTTAATGGACGTGACGTAAGCCAGATGACAGATGATGAGCTA
GCTGAAGTACGTAACACCGAAATAGGTTTTGTATTTCAAACTTTTAATTTACTTCCTAGAACCACTGCTCTTGACAACGT
AGCATTACCAATGGTATATGCAGGAATGTCAAAATCTGCACGTAATGCTCGTGCCGAAGAGGTACTTACAGATGTAGGTC
TTGCAGATCGTATGGACCACAAACCTAACCAACTCTCTGGAGGGCAACGACAACGTGTTGCTGTAGGTCGTGCGCTAGTA
AACAAACCATCCATCATCCTTGCAGATGAGCCTACAGGTAATCTTGACTCAAAAACTGGTGTCGAGATTATGGCACTTTT
TGACGCAATACATGCCGCAGGTAATACCGTAATTCTTGTTACACATGAGGAAGATATTGCAGAGCATGCACATCGTGTAA
TTAGATTGCGTGATGGAGTCATTGAGAGTGACACTAGAAAAACAGATAAGTAA

Protein sequence : 
MGNLIKIRNIIRDFPLGTEIVHVLKGIDLDIDKGEYVAFMGPSGSGKSTLMNLLGCLDTPTAGSYVLNGRDVSQMTDDEL
AEVRNTEIGFVFQTFNLLPRTTALDNVALPMVYAGMSKSARNARAEEVLTDVGLADRMDHKPNQLSGGQRQRVAVGRALV
NKPSIILADEPTGNLDSKTGVEIMALFDAIHAAGNTVILVTHEEDIAEHAHRVIRLRDGVIESDTRKTDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krodi_2041 YP_004431292.1 ABC transporter NC_012469.1.7686878. Protein 1e-61 56
Krodi_2041 YP_004431292.1 ABC transporter NC_008702.1.4606598. Protein 1e-52 54
Krodi_2041 YP_004431292.1 ABC transporter CP001581.1.gene798.p Protein 3e-42 44
Krodi_2041 YP_004431292.1 ABC transporter CP001581.1.gene598.p Protein 4e-42 43