Gene Information

Name : Krodi_1592 (Krodi_1592)
Accession : YP_004430843.1
Strain : Krokinobacter sp. 4H-3-7-5
Genome accession: NC_015496
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1810421 - 1811122 bp
Length : 702 bp
Strand : +
Note : KEGG: cat:CA2559_01135 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGATTGAAATACAAGGCCTTCACAAATCGTATCAGATGGGGAGCAACTCTCTTCACGTTCTTAAGGGTATAGACTTTTC
TGTAAAAGAGGGAGAGCTAGTTTCAATTATGGGATCTTCTGGGTCTGGAAAATCTACGCTTTTAAACATACTGGGAATGC
TTGATGAGGCAGATGAGGGTAATTATACGCTAGATAATGTCCCAATTAAAAACCTCAATGAAAAAATAGCAGCCCAATAC
CGTAATAAATTCTTAGGATTTATTTTTCAATCATTTAATCTTATTAATTATAAAAATGCACTTGATAATGTCTCAATGCC
GTTATACTATCAAGGTATGAAGCGTGCAGAGCGTACAGATAGAGCCATGCATTATCTAGAAAAAGTAGGTCTTGCACAGT
GGGCAACGCACTTGCCTAGTGAGATGTCTGGAGGGCAAAAGCAACGTGTTGCAATAGCGCGTGCACTAGCGAGTGACCCA
AAAGTTTTACTAGCAGATGAGCCAACGGGAGCACTTGATACAAAGACATCTTATGAGGTGATGGATCTCATACAAGGAAT
TAATGATGAGGGCAAAACAATCTTAATTGTTACCCACGAGCCAGATATCGCAGAGATGACTAAGCGCATCGTAAATCTAA
AAGACGGTCGCATTATAGATGATACACTCGTAAATCAAGTAAAGGCAATCAATCATGTTTGA

Protein sequence :
MIEIQGLHKSYQMGSNSLHVLKGIDFSVKEGELVSIMGSSGSGKSTLLNILGMLDEADEGNYTLDNVPIKNLNEKIAAQY
RNKFLGFIFQSFNLINYKNALDNVSMPLYYQGMKRAERTDRAMHYLEKVGLAQWATHLPSEMSGGQKQRVAIARALASDP
KVLLADEPTGALDTKTSYEVMDLIQGINDEGKTILIVTHEPDIAEMTKRIVNLKDGRIIDDTLVNQVKAINHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krodi_1592 YP_004430843.1 ABC transporter NC_012469.1.7686878. Protein 1e-53 52
Krodi_1592 YP_004430843.1 ABC transporter NC_008702.1.4606598. Protein 1e-40 43
Krodi_1592 YP_004430843.1 ABC transporter CP001581.1.gene798.p Protein 6e-34 41