Gene Information

Name : Krodi_1303 (Krodi_1303)
Accession : YP_004430554.1
Strain : Krokinobacter sp. 4H-3-7-5
Genome accession: NC_015496
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1466353 - 1467495 bp
Length : 1143 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gfo:GFO_3443 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme

DNA sequence :
ATGAAATTTAATACTAAGACAATACATGGTAAACAGCATCCAGATAAGGCTTATGGATCTGTAATGCCTCCTATATATCA
AACTTCTACTTATGCACAATCTACGCCAGGTGGTCATAAGGGATATGAGTATAGTCGCTCTGCAAACCCAACGCGTCACG
CACTTGAGCAGTCGCTTGCAAGTATAGAGAATGGAGAATACGGAATCGCTTTTGCATCTGGACTGGCTGCAATAGATGCG
ATAATAAAGTTACTTAAGCCGGGTGATGAGGTGGTGTCAACAAGTGATCTTTATGGTGGTACGTATCGGCTTTTTACTAA
GATATTTGAAAGTTTTGGTATTAAGTTCCACTTTATAGGAATGCAAGATGTCAAGAATATAGAAACATATATTAATGAAA
AAACAAAGCTCATTTGGGTAGAAACGCCTACGAACCCGATGATGAGTATTATTGATATTGAGGCAGTTTCATCAATATCA
AAAAAGTATAAGATCCTGTTTGCGGTAGATAACACTTTTGCAACTCCTTATTTACAACTACCCCTTGATTTAGGTGCCGA
TATTGTGATGCATAGTGCCACAAAGTATTTAGGAGGTCATAGCGATCTGGTTATGGGTGCTCTTGTTGTAAAGAATAAGG
AGCTAGCAGATAGATTATACTTTATACAAAATGCAAGTGGTGCCATAAGTGGGCCTCAAGATAGCTTTCTGGCATTGCGT
GGTATAAAGACATTACACGTCCGAATGCAAAGACACTGTGAAAATGGTAAGGCTGTTGCTCACTATCTTAAGTCTCATCC
TATGGTTGATAAAGTATACTGGCCTGGCTTTGAAGATCACCCTAATCATCATATTGCCAAAAGACAGATGAAAGACTATG
GAGCTATGATTTCATTTACTACTAAGCAAGATTCGCTAGCGGGTGCTGTAAGCTTTGCGGAAAAGCTACAAATTTTTACC
CTCGCCGAAAGTCTAGGAGGTGTGGAGTCACTTGCGGGTCATCCTGCTTCAATGACGCATGGTTCCATCCCTAAAGATGA
CCGAGAAAAACTTGGAATTAAAGATTCTTTAGTGAGATTGAGTGTAGGTATTGAAGATGAAGAAGACCTGATAGCAGATC
TTAAACAGGCACTAGAAAACTAA

Protein sequence :
MKFNTKTIHGKQHPDKAYGSVMPPIYQTSTYAQSTPGGHKGYEYSRSANPTRHALEQSLASIENGEYGIAFASGLAAIDA
IIKLLKPGDEVVSTSDLYGGTYRLFTKIFESFGIKFHFIGMQDVKNIETYINEKTKLIWVETPTNPMMSIIDIEAVSSIS
KKYKILFAVDNTFATPYLQLPLDLGADIVMHSATKYLGGHSDLVMGALVVKNKELADRLYFIQNASGAISGPQDSFLALR
GIKTLHVRMQRHCENGKAVAHYLKSHPMVDKVYWPGFEDHPNHHIAKRQMKDYGAMISFTTKQDSLAGAVSFAEKLQIFT
LAESLGGVESLAGHPASMTHGSIPKDDREKLGIKDSLVRLSVGIEDEEDLIADLKQALEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-83 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-84 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-65 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krodi_1303 YP_004430554.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 2e-73 43