|
Name : Krodi_0990 (Krodi_0990) Accession : YP_004430242.1 Strain : Krokinobacter sp. 4H-3-7-5 Genome accession: NC_015496 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1126393 - 1127664 bp Length : 1272 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: gfo:GFO_3506 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTAGAAGTAGCACACATTAGAGAAAACAAAGAAGCTTTCGCGAAAGCGTTATCTAAAAGAAATATAGACGCTGCAAC CTTACTTGATCAAGTAGTAGCGGCAGATGATCTTCGTCGTAGTTCGCAAGCGCAACTTGATGAAGTACTTGCAGATAGTA ATAAGTTTTCCAAGGAAATAGGAATGCTTTTTAAAAGTGGAGAAGCTCAAAAAGCTAATATTCTTAAAGAGAAAACTGCA GGTTTAAAAGAACAATCTAAAACCCTCCAAGAGCAATTAAACACTGCTTCTGAGGATTTGCAGAACTTGCTATATCAAAT CCCAAACATTCCACATGACAGTGTTCCTGAGGGTAACAGTGATGAGGATAATGAAGAAATCTTTCGTAAGGGAGATATTC CTGAGTTGCATGAAGCAGCACAGCCACACTGGGAGCTTGCAAAGAAATATGATATTATTGATTTTGAACTAGGAACTAAG ATTGCTGGGGCTGGTTTTCCGGTGTATAAAGGCAAAGGAGCACGATTACAACGTGCGCTTATCGCTTATTTTTTAGACAA AAATACCGAGGCTGGATATACAGAATACCAAGTGCCGCACCTTGTAAATGAGGCGTCAGGTTTTGGTACTGGCCAACTTC CAGATAAGGAAGGGCAAATGTATCATGTGACCGAAGACGATTTATATTTAATCCCTACGGCAGAGGTGCCAGTGACAAAT ATGTTTCGCGGTGATTTACGTAATCACAATGAGTTGCCTATTACATGTACGGGGTACACACCATGTTTCCGTCGTGAGGC GGGATCTTATGGAGCACACGTACGCGGGTTAAATCGCTTGCACCAGTTTGATAAAGTTGAGATTGTACGTATAGAACGTC CAGAAGATAGTGCAGCTGCACTAGACGGGATGGTAGATCACGTAAAAACAATACTGGATGAGCTAGAGATGCCTTACAGA ATTTTACGTCTTTGTGGTGGTGACCTTGGGTTTACAGCGCACCTTACCTATGATTTTGAATTATTTTCTACAGCGCAAGA TCGCTGGTTAGAAATTAGTTCTGTTTCTAACTTCTTGACCTTTCAAGCAAACCGTTTAAAACTTCGTTTTAAGGATGAAG ATGGTCAGAACAAGCTTGCACATACACTTAATGGTAGCTCACTAGCGCTGCCACGCGTACTTGCAGGAATTCTTGAAAAC TGCCAGACACCAGAAGGAATAAAAATTCCTAAGGCACTTATCCCTTATTGCGGATTTGATATGATTAACTAA Protein sequence : MLEVAHIRENKEAFAKALSKRNIDAATLLDQVVAADDLRRSSQAQLDEVLADSNKFSKEIGMLFKSGEAQKANILKEKTA GLKEQSKTLQEQLNTASEDLQNLLYQIPNIPHDSVPEGNSDEDNEEIFRKGDIPELHEAAQPHWELAKKYDIIDFELGTK IAGAGFPVYKGKGARLQRALIAYFLDKNTEAGYTEYQVPHLVNEASGFGTGQLPDKEGQMYHVTEDDLYLIPTAEVPVTN MFRGDLRNHNELPITCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIERPEDSAAALDGMVDHVKTILDELEMPYR ILRLCGGDLGFTAHLTYDFELFSTAQDRWLEISSVSNFLTFQANRLKLRFKDEDGQNKLAHTLNGSSLALPRVLAGILEN CQTPEGIKIPKALIPYCGFDMIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-71 | 42 |
