Gene Information

Name : YE105_P0042 (YE105_P0042)
Accession : YP_004424944.1
Strain :
Genome accession: NC_015475
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 31947 - 32573 bp
Length : 627 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAATTATATTACCTCTTTTCAATTGCGCTTCTGCCCCGCGGCTTATTTGCACTTGGAACAGTTACCATCATTATG
GCGTTCAATATTGCCCTACTTACCTCAGTGGCGCGATAGTGCTCATCTCAATGCTGCTTTATTGGATGAATTTTCTCTTG
ATACCGACTATGAAGAGCCCCATGGGTTGGGGGCGCTGCCTTTGCAGCCCCAATCACAGCTCGAACTGTTACTTTGTCGC
CTTGGATTAGTTCTGCATGGGGAGGCGATTCGCCGTTGTGTACTGGCCTCCCCATTACAACAATTATTGACATTGGTTAA
TCAAGAAACATTAAGGCAAATTATTGTACAGCATGAGCTGCTAATCGGGCCTTGGCCCACTAACTGGCAGCGCCCGCTGC
CGACAGAAATAGAGAGCCGTACCATGATCCAGTCGGGGCTGGCTTTTTGGTTAGCAGCAATGGAACCCCAACCTCAGGCA
TGGTGTAAACGGCTCAGTTTACGCCTCCCATTAGCTACGCCGTCAGAACCTTGGTTAGTGGCCGAGTCACAACGCCCACT
GGCCCAAACTTTATGTCACAAACTTGTCAAACAGGTTATGCCTACATGCAGCCATTTGTTCAAATAA

Protein sequence : 
MENYITSFQLRFCPAAYLHLEQLPSLWRSILPYLPQWRDSAHLNAALLDEFSLDTDYEEPHGLGALPLQPQSQLELLLCR
LGLVLHGEAIRRCVLASPLQQLLTLVNQETLRQIIVQHELLIGPWPTNWQRPLPTEIESRTMIQSGLAFWLAAMEPQPQA
WCKRLSLRLPLATPSEPWLVAESQRPLAQTLCHKLVKQVMPTCSHLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscK AAO18026.1 LscK Virulence TTSS locus Protein 7e-40 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_P0042 YP_004424944.1 type III secretion protein VFG0410 Protein 2e-81 99
YE105_P0042 YP_004424944.1 type III secretion protein VFG0219 Protein 2e-23 41