Gene Information

Name : YE105_P0029 (YE105_P0029)
Accession : YP_004424931.1
Strain :
Genome accession: NC_015475
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4792
EC number : -
Position : 22679 - 23743 bp
Length : 1065 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGGAGAAAAGACAGAGCAACCCACCCCGAAGAAAATCCGTGATGCGCGCAAAAAGGGACAGGTAGCGAAAAGTAA
GGAAGTGGTCTCTACTACGCTTATCGTCGCGCTGAGTGCGATGTTAATGGGGCTTTCTGACTACTATTTCGAGCATTTGA
GTAGGCTAATGCTAATCCCCGCAGAGCAGAGCTATCTTCCTTTCTCGCAGGCGCTTAGCTATGTGGTTGACAATGTGTTG
CTCGAGTTTTTTTATCTCTGTTTTCCTTTGTTAACAGTGGCGGCATTGATGGCGATCGCTTCTCATGTTGTGCAGTATGG
TTTTCTTATAAGTGGTGAAGCAATTAAACCGGATATTAAAAAAATCAATCCAATAGAGGGTGCCAAGCGTATCTTTTCCA
TCAAAAGTTTAGTGGAGTTTCTCAAATCCATTCTCAAGGTTGTTTTGCTCAGTATACTCATCTGGATAATCATTAAGGGA
AATCTGGTCACACTCTTGCAGTTGCCAACCTGTGGAATTGAATGTATTACCCCTTTATTGGGGCAAATACTCCGGCAGTT
GATGGTGATCTGTACTGTTGGCTTTGTGGTCATCTCCATAGCTGACTATGCCTTTGAATACTATCAATATATTAAGGAAC
TTAAAATGAGCAAGGATGAGATCAAACGCGAGTACAAAGAAATGGAGGGTAGCCCAGAAATCAAAAGCAAGCGCCGTCAG
TTTCATCAAGAGATCCAATCGGGGAACATGCGGGAAAATGTTAAACGCTCATCAGTGGTGGTAGCTAATCCGACCCATAT
TGCTATTGGTATTCTTTATAAGCGAGGGGAAACACCACTACCGTTGGTAACATTCAAATATACCGATGCCCAAGTTCAGA
CTGTGCGCAAAATAGCAGAAGAAGAAGGGGTGCCTATTTTACAACGTATCCCATTAGCCCGTGCTCTTTATTGGGATGCG
CTCGTCGATCACTATATTCCGGCTGAGCAAATAGAGGCCACAGCTGAAGTGCTACGATGGCTAGAAAGGCAAAATATCGA
GAAACAGCATTCCGAAATGTTATAA

Protein sequence : 
MSGEKTEQPTPKKIRDARKKGQVAKSKEVVSTTLIVALSAMLMGLSDYYFEHLSRLMLIPAEQSYLPFSQALSYVVDNVL
LEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKG
NLVTLLQLPTCGIECITPLLGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRRQ
FHQEIQSGNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDA
LVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 9e-116 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_P0029 YP_004424931.1 putative type III secretion protein VFG0397 Protein 6e-155 99
YE105_P0029 YP_004424931.1 putative type III secretion protein VFG0185 Protein 2e-96 67