Gene Information

Name : YE105_P0028 (YE105_P0028)
Accession : YP_004424930.1
Strain :
Genome accession: NC_015475
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 21894 - 22679 bp
Length : 786 bp
Strand : +
Note : -

DNA sequence : 
ATGATAGCGGATTTAATCCAAAGACCATTGCTCACTTATACCCTGCTGTTGCCTCGTTTTATGGCTTGTTTTGTTATATT
GCCAGTGTTAAGTAAACAGCTCCTCGGTGGAGTATTGCTGCGTAATGGTATTGTCTGTTCATTGGCTCTTTATGTCTATC
CTGCCGTCGCTAACCAACCTTATATTGAGGTTGATGCGTTTACGTTGATGCTGCTTATCGGCAAAGAGTTCATACTGGGG
TTATTGATTGGGTTTGTGGCCACCATCCCTTTCTGGGCCTTAGAATCCGCAGGATTTATTGTAGATAACCAAAGAGGTGC
CGCGATGGCATCTCTACTCAACCCTGGACTTGATAGTCAAACTAGTCCGACTGGTTTACTTTTGACTCAAACGTTAATAA
CAATTTTCTTCTGCGGAGGGGCTTTCCTCTCTTTGCTTTCAGCCCTCTTTCACAGCTATGTAAATTGGCCGGTGGCCAGC
TTTTTCCCTGAAGTTAGTGAACAGTGGGTTGATTTCTTTTATAACCAATTCAGCCAGATACTATTAATCGCCGCTGTATT
GGCTGCTCCTTTACTCATCGCTATGTTTTTAGCTGAATTTGGACTTGCACTCATCAGTCGTTTTGCGCCTTCTTTAAACG
TCTTTGTGCTGGCTATGCCGATAAAAAGCGCGATAGCAAGCCTGTTGTTGGTTATCTACTGTATGCAAATGATGAGTCAT
GCCAGTAAAGCAATGCTGTTGGTTATGGATCCTATAAGTTTACTGATCCCTGTTTTGGAGAAGTAA

Protein sequence : 
MIADLIQRPLLTYTLLLPRFMACFVILPVLSKQLLGGVLLRNGIVCSLALYVYPAVANQPYIEVDAFTLMLLIGKEFILG
LLIGFVATIPFWALESAGFIVDNQRGAAMASLLNPGLDSQTSPTGLLLTQTLITIFFCGGAFLSLLSALFHSYVNWPVAS
FFPEVSEQWVDFFYNQFSQILLIAAVLAAPLLIAMFLAEFGLALISRFAPSLNVFVLAMPIKSAIASLLLVIYCMQMMSH
ASKAMLLVMDPISLLIPVLEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 2e-58 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_P0028 YP_004424930.1 putative type III secretion protein VFG0396 Protein 1e-87 99
YE105_P0028 YP_004424930.1 putative type III secretion protein VFG0186 Protein 3e-54 69