Gene Information

Name : YE105_P0002 (YE105_P0002)
Accession : YP_004424904.1
Strain :
Genome accession: NC_015475
Putative virulence/resistance : Virulence
Product : plasmid type III secretion system effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1221 - 2189 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence : 
ATGGACAGTATTCACGGACACTACCATATCCAACTATCGAATTATTCTGCCGGTGAAAACCTTCAATCAGCTACACTCAC
CGAAGGGGTGATTGGCGCACACCGAGTGAAAGTGGAAACAGCACTGTCACACTCAAACCGGCAGAAAAAGTTATCAGCTA
CCATAAAACATAACCAGTCAAGCCGTTCTATGCTGGATAGAAAGTTGACCAGCGACGGCAAAGCTAACCAACGAAGCAGC
TTTACCTTCAGTATGATTATGTATCGCATGATACATTTTGTACTCAGTACTCGTGTGCCCGCGGTGAGAGAGTCTGTTGC
AAATTACGGAGGTAACATCAATTTCAAGTTTGCTCAGACCAAAGGGGCTTTTCTTCATCAAATAATAAAACATTCAGACA
CCGCTAGCGGTGTCTGTGAGGCTTTATGTGCACATTGGATTTGGAGTCATGCACAGGGCCAAAGCTTATTTGACCAGCTC
TATGTTGGCGGGCGTAAAGGGAAATTCCAGATCGATACACTTTACTCAATTAAACAGTTGCAAATAGATGGTTGTAAAGC
AGACGTTGATCAAGATGAGGTAACACTAGATTGGTTCAAGAAAAAGGGCATATCAGAACGTATGATTGAACGGCATTGCT
TACTGCGTCCAGTTGATGTTACTGGTACGACGGAATCAGAAGGGCCGGATCAATTATTAAACGCTATCCTTGATACTCAT
GGGATAGGTTACGGTTATAAAAAAATATATCTCTCAGGCCAAATGTCAGCCCACGCCATAGCGGCGTATGTCAACGAAAA
GAGTGGTGTTACTTTCTTCGATCCCAATTTCGGTGAATTCCACTTTTCTGATAAGGAAAAGTTCCGCAAATGGTTTACTA
ACTCATTCTGGGAAAATTCTATGTATCATTATCCTCTGGGGGTGGGGCAGCGTTTTAGCGTGTTAACATTTGACTCCAAG
GAGGTTTAA

Protein sequence : 
MDSIHGHYHIQLSNYSAGENLQSATLTEGVIGAHRVKVETALSHSNRQKKLSATIKHNQSSRSMLDRKLTSDGKANQRSS
FTFSMIMYRMIHFVLSTRVPAVRESVANYGGNINFKFAQTKGAFLHQIIKHSDTASGVCEALCAHWIWSHAQGQSLFDQL
YVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTLDWFKKKGISERMIERHCLLRPVDVTGTTESEGPDQLLNAILDTH
GIGYGYKKIYLSGQMSAHAIAAYVNEKSGVTFFDPNFGEFHFSDKEKFRKWFTNSFWENSMYHYPLGVGQRFSVLTFDSK
EV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18078.1 putative type III secreted effector LopT Not tested TTSS locus Protein 2e-76 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_P0002 YP_004424904.1 plasmid type III secretion system effector protein VFG0375 Protein 2e-146 97