Gene Information

Name : PNA2_1585 (PNA2_1585)
Accession : YP_004424504.1
Strain : Pyrococcus sp. NA2
Genome accession: NC_015474
Putative virulence/resistance : Resistance
Product : copper-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1470881 - 1472887 bp
Length : 2007 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAATAAAGATCACGAAATGAAAACTCACGAGGGGCACCATCATGAAAAGCCCTCTCATGCAGAACACCATAAAAT
GATGATGGAGGATTTTAAAAGGCGTTTCATAGTATCAACGATACTTACGATACCAATTCTAATTCTATCTCCATTGGTGC
AAAACTTCTTCCGATTTAATGTTAGTTTTCCTGGTGACCATTATATTCTCTTTGGGCTCTCGGCGATTGTTTACTTCTAT
GGCGGAAAACCTTTCCTTAAGGGAATGAAAGAGGAACTTCAAAAGAAATTACCTGGAATGATGACGTTAATAGCGTTGGC
AATAACTGTTGCATTCTCATACAGCGTAGCAGTGACTTTTGGCCTACAGGGAAAGACCTTCTATTGGGAACTTGCCACAC
TTATAGACATTATGCTTCTTGGCCATTATATTGAGATGCGCTCCATCCTCGGTGCCTCAAGAGCATTGGAAGAACTTATA
AAGCTAATGCCCACAGAGGCACATCTTATAACCTCCAAGGGAATAAGAAATATTCCAGTGAGCGAATTAAAGAAGGGAGA
CATTGTCCTTGTTAAGCCTGGTGAGAAGATACCTGCAGATGGCATCATAATTGAAGGAGAGACAAGTGTGAACGAAGCAA
TGCTGACTGGTGAGTCAAGGCCAGTCTATAAGAAACCTGGCGACATTGTTATTGGTGGATCAATAAACTTGGAGGGCTCA
ATCAAGGTAAGGATCGAGAAAACTGGAAAAGAGACTTATTTGATGCAGGTAGTTGAGCTCGTAAAGCAGGCTCAAGAGAC
GAGATCAAGAACTCAAGATTTAGCTAATAAGGCGGCCTTTTGGCTCACAATTATAGCGATAACCGCTGGGAGTATAACCT
TAGGACTCTGGCTTTACTTTGGCAAGCCTTTCGTCTTCGCCTTGGAAAGAATGGTCACCGTCATGGTGATTACATGCCCC
CATGCTTTGGGATTAGCTGTCCCGTTAGTAGTCTCAGTTTCAACATCGATATCAGCAAAAAAGGGAATACTCATAAGGAA
TAGGGAAGCGTTTGAGAGGGCAAAGGATGTTCAGGTGGTTGTCTTTGACAAGACGGGAACATTAACAGAAGGAAAGTTTG
AAGTAACAGATATAATACCGCTGAATGAGATTAGCGAGGAAGAAATTTTAAAATACGCAGCAACACTGGAGAGTCATTCA
AATCATCCAATAGCGCAGGGAATAGTTGAAAAAGCAAAAGAAAAGAAGATTAAGCCTTATGAAGTTAAGAAATTCAAAGC
AATTCCAGGAAAAGGCGCTCAAGGCATTGTCAATGACAAAGAAGTTCTCATTGTAAGCCCGGGGTTTTTAAAAGAGAAAG
GACTTTGGAAAGAGAATGAACGTGTTAACAAAGTTCTAGAGCAGGGAAAAACTGTGGTATTCTTAATTATTGACGGAAAA
CTTGTCGGTGCTTTGGCTTTAGCTGATAAGATAAGACCAGAGTCAAGGGAAGCAATAAGAAAGCTTCATGAGATGGAGAT
TAAAGCTTACATGCTCACTGGAGACAATGCCAAGGTAGCTAAGTGGGTTGCTGAAGAACTCGGTCTAGATGGCTACTTCG
CAGAGGTCTTGCCTCACCAGAAGTCGGAGAAAATCAAAAAGCTTCAAGAATCTGGCTTTGTTGTCGCAATGGTTGGGGAT
GGAATAAATGATGCTCCAGCCCTAATTCAAGCAGATGTTGGAATAGCAATTGGAGCTGGAACCGATGTGGCAATAGAGAG
TGCCGATATAATTCTTGTCAAGAACGATCCAAGAGATGTTATAACGGCGATACATCTTGCTAAGGCGACCTACAGAAAGA
TGGTGCAAAATTTAGCGTGGGCAACTGGTTATAATACATTTGCAATTCCCTTAGCAGCTGGAGCACTTTACAGCTATGGG
ATATTGCTAAGCCCAGCGGTGGGTGCTTTATTAATGAGTCTAAGCACGGTGATAGTTGCTATAAATGCAAAGTTCTTGAA
GGTTTGA

Protein sequence :
MKNKDHEMKTHEGHHHEKPSHAEHHKMMMEDFKRRFIVSTILTIPILILSPLVQNFFRFNVSFPGDHYILFGLSAIVYFY
GGKPFLKGMKEELQKKLPGMMTLIALAITVAFSYSVAVTFGLQGKTFYWELATLIDIMLLGHYIEMRSILGASRALEELI
KLMPTEAHLITSKGIRNIPVSELKKGDIVLVKPGEKIPADGIIIEGETSVNEAMLTGESRPVYKKPGDIVIGGSINLEGS
IKVRIEKTGKETYLMQVVELVKQAQETRSRTQDLANKAAFWLTIIAITAGSITLGLWLYFGKPFVFALERMVTVMVITCP
HALGLAVPLVVSVSTSISAKKGILIRNREAFERAKDVQVVVFDKTGTLTEGKFEVTDIIPLNEISEEEILKYAATLESHS
NHPIAQGIVEKAKEKKIKPYEVKKFKAIPGKGAQGIVNDKEVLIVSPGFLKEKGLWKENERVNKVLEQGKTVVFLIIDGK
LVGALALADKIRPESREAIRKLHEMEIKAYMLTGDNAKVAKWVAEELGLDGYFAEVLPHQKSEKIKKLQESGFVVAMVGD
GINDAPALIQADVGIAIGAGTDVAIESADIILVKNDPRDVITAIHLAKATYRKMVQNLAWATGYNTFAIPLAAGALYSYG
ILLSPAVGALLMSLSTVIVAINAKFLKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-98 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PNA2_1585 YP_004424504.1 copper-transporting ATPase BAC0629 Protein 0.0 69
PNA2_1585 YP_004424504.1 copper-transporting ATPase BAC0079 Protein 2e-131 50
PNA2_1585 YP_004424504.1 copper-transporting ATPase BAC0383 Protein 9e-111 46
PNA2_1585 YP_004424504.1 copper-transporting ATPase BAC0183 Protein 6e-89 41
PNA2_1585 YP_004424504.1 copper-transporting ATPase BAC0622 Protein 1e-86 41