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Name : CPSIT_0498 (CPSIT_0498) Accession : YP_004422304.1 Strain : Chlamydia psittaci 6BC Genome accession: NC_015470 Putative virulence/resistance : Virulence Product : putative membrane transport protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 517400 - 519472 bp Length : 2073 bp Strand : - Note : - DNA sequence : ATGATCAACAAATCGAGTGACCTCATCCTTGCCTTATGGATGATCGGTGTCGTTTTGATGATCATCTTGCCCCTACCTCC GACTATTGTCGACTTGATGATCACTATCAATTTAGCTGTTTCTGTCTTCCTATTGATGGTGGCTTTGTACATTCCTAGCG CTTTACAATTATCGGTGTTCCCCTCGCTACTCCTAATCACAACAATGTTTCGATTAGGTATTAACATTTCTTCTTCTAGA CAGATTCTTCTTAAAGCTTATGCCGGTCACGTCATTCAAGCTTTCGGAGACTTCGTAGTTGGAGGGAACTATGTTGTTGG ATTTATTATCTTCTTAATTATTACGATTATTCAATTTATCGTTGTTACCAAGGGTGCTGAGCGTGTTGCTGAAGTAGCTG CAAGATTCCGATTAGATGCTATGCCTGGTAAGCAAATGGCTATTGATGCTGACTTGCGTGCCGGAATGATTGATGCACAA CAAGCCCGCGATAAACGAGGCATGATTCAAAAGGAAAGTGAACTCTATGGAGCCATGGACGGTGCCATGAAGTTCATTAA AGGGGACGTTATCGCAGGTATTGTGATCTCGTTAATTAACATTGTCGGTGGTTTGACTATTGGTGTGGCTATGCACGGCA TGGACCTAGCTCAAGCTGCTCACGTATACACTCTGTTATCTATCGGTGATGGTTTAGTTTCTCAGATTCCTTCACTACTG ATTTCCTTAACTGCTGGTATCGTTACTACTCGAGTTTCTAGTGATAAAAACACGAACTTAGGTAAAGAGATTTCCTCTCA GTTAGTTAAAGAACCTAGAGCTTTACTCTTAGCCTCTGCAGCAACTTTAGGCGTGGGCTTTTTTAAAGGGTTCCCACTTT GGTCATTCTCCATACTCTCTCTTATCTTTGGTATTCTTGGTGTTATCCTTCTTGCGAAGAAAAACAGTGCTTCTAAACAG GGTGCCTCTGGAGCATCAACAACAGTAGGAGCTGCTTCAGACGGAGCTGCAGCAGCTGGAGATAACCCGGATGATTACTC CTTAACGTTGCCAGTAATTTTAGAATTAGGAAAAGACTTATCTAAGTTGATTCAACAAAAAACGAAGTCTGGTCAAAGTT TCGTTGACGATATGATCCCGAAAATGCGTCAAGCTTTGTATCAAGATATTGGTATTCGTTACCCAGGAATTCATGTGCGC ACTGACTCTCCTTCTCTAGAGGGTTATGATTACATGATTCTTCTTAATGAAGTTCCCTACGTTCGAGGAAAAATTCCTGC AAACCATGTGTTAACTAACGAAGTTGAAGAAAATCTTAAGAGATACAATCTTCCTTTCCTTACTTATAAAAATGCTGCGG GTCTCCCTTCTGCTTGGGTTAGTGAAGATGCTAAAGCTATTCTAGAAAAAGCAGCTATTAAGTATTGGACACCTTTAGAG GTGATTATTCTTCATCTGTCTTACTTCTTCCATAGAAGCTCCCAAGAATTCTTAGGAATTCAAGAGGTACGCTCTATGAT TGAATTTATGGAACGCTCGTTCCCAGATCTTGTTAAAGAAGTTACGCGACTTATCCCTCTGCAAAAGCTTACTGAAATTT TCAAACGTTTAGTCCAAGAGCAGATCTCTATCAAAGACCTACGTACAATTTTAGAATCCTTAAGTGAATGGGCTCAAACT GAAAAAGATACTGTATTGCTAACTGAATACGTACGTTCTTCTCTGAAACTTTACATTAGTTTCAAATTTTCCCAAGGACA ATCTGCAATCTCAGTTTATTTACTCGATCCAGAAATTGAAGAGATGATCCGTGGAGCCATTAAACAAACCTCTGCAGGAT CTTATCTTGCTTTGGATCCTGATTCTGTAAACCTAATCTTAAAATCTATGAGAAATACAATTACGCCAACTCCTCCAGGA GGTCAGCCTCCTGTGCTGTTGACAGCAATTGACGTAAGACGATATGTAAGGAAATTAATAGAAACAGAATTCCCTGATAT CGCTGTGATTTCTTACCAAGAGATTCTCCCAGAGATTCGCATCCAGCCATTAGGAAGAATTCAGATTTTCTAA Protein sequence : MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSR QILLKAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAMPGKQMAIDADLRAGMIDAQ QARDKRGMIQKESELYGAMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILSLIFGILGVILLAKKNSASKQ GASGASTTVGAASDGAAAAGDNPDDYSLTLPVILELGKDLSKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVR TDSPSLEGYDYMILLNEVPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSAWVSEDAKAILEKAAIKYWTPLE VIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRLVQEQISIKDLRTILESLSEWAQT EKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTITPTPPG GQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 6e-140 | 46 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 6e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPSIT_0498 | YP_004422304.1 | putative membrane transport protein | VFG2126 | Protein | 0.0 | 91 |
| CPSIT_0498 | YP_004422304.1 | putative membrane transport protein | VFG0384 | Protein | 9e-140 | 46 |
| CPSIT_0498 | YP_004422304.1 | putative membrane transport protein | VFG0064 | Protein | 8e-143 | 46 |
| CPSIT_0498 | YP_004422304.1 | putative membrane transport protein | VFG0198 | Protein | 4e-129 | 46 |
