Gene Information

Name : UMN179_00894 (UMN179_00894)
Accession : YP_004419819.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 959635 - 961719 bp
Length : 2085 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGCAGAAACATTACTTGATCATTTGCCTCTTACTGTTCTTTCCGGTGTTGGCGTGGCAATGTCGGAAAGATTATC
TCGTTTAGGAATCCGTTCCGTTCAAGATCTCTTATTCCATTTTCCATTGCGTTACGAAGATCGCACACATATTACCCCAA
TCATTGATTTGCGTCCGGATAGTTATGCCACGATCGAGGGCATTGTGCAGACGTGTGAAGTTCAGTTTGGTCGCCGGCCG
ATGTTAACGGTTTCCCTTTCTGACGGCTCATCAAAAATTATGTTGCGTTTTTTTAATTTTAATGCCGGAATGAAGAACAG
TTTTTCGAGTGGAGCCAGAGTAAAGGCATTCGGGGAAATCCGACGTGGACGATTTATGGCGGAAATGCACCATCCGGAAT
ATCGTATTATTCACCATAATGAGCCTTTGACCTTAGATGAAAACCTCACGCCGATTTACCCTTCAACGGAAGGACTAAAA
CAAGCATCTTGGCGAAAATTGACGGATCAAGCATTGGCATTATTGGATAAAGCCACTATTAAAGAGCTGCTTCCCACAGA
ATTTAACCCTAGTGGCTATGATTTGAAAAGTGCAGTGCAGTTTTTACATCGACCGCCGGCGGGTACTCTATCTGAAATGT
TGGAAAAAGGGGAACATCCGGCACAACAGCGTTTAGCATTTGAAGAGCTGTTAGCACATAACTTAGCAATGCAAAAAAGT
AAGCAAGATGCACAACAGAACTCAGCGATTGCGTTACGTTATCAGAGCAATATCAAGCAACAATTCTTGGCAACGTTGCC
ATTTACCCCAACAAAAGCACAATTACGAGTAGTAGAAGAGATTGAGCAGGATCTGCAACGATCTCAACCGATGATGCGTT
TAATTCAAGGCGATGTTGGTTCTGGAAAAACATTAGTGGCATTATTGGCTTCTTTAGTGGCGTTGGATAATCAGCAACAG
GTGGCGATTATGGCGCCAACGGAAATTCTTGCAGAACAGCATTTGCATAATTTTTCTCATTGGCTGGAACCGTTTGGCAT
TAAGGTCGGTTGGTTGGCAGGTAAGGTAAAAGGCAAAAAACGACAGCAGTCATTGGCACAGATTCAATGTGGTGAAACGC
AGGTTGTTATTGGCACGCACGCTTTATTTCAGGAGCAAGTGGAGTTTCATTCGTTAGCGTTGGTGATCATTGATGAACAG
CACCGTTTCGGCGTTGAACAACGGTTATTATTGCGTGAAAAAGGTGCAAAGAATGGATTGTATCCGCATCAACTGATTAT
GACGGCGACACCAATTCCTCGTACCTTAGCAATGACGGTATATGCTGATTTGGATGTTTCCGTTATTGATGAGTTACCAC
CCGGCAGAACGCCGATAAAAACTGTAGCGATTGCGGAAGATCGACGAGATGAATTGGTTCAGCGCGTGTTTCACGCTTGT
ACTGTGGATAAACGGCAAGTTTATTGGGTTTGTACATTAATTGATGAGTCTGAAGTGTTGGAGGCGCAAGCAGCCGAAGC
ATTGGCAGAGGATTTACGCAAAGCATTACCAATGCTTAAAATCGGTTTAGTTCACGGCAGAATGAAACCGCAGGAAAAAC
AGGATGTAATGGCTATTTTTAAGGCCGGTGAAATTGATGTGTTGGTGGCAACCACTGTCATTGAGGTTGGTGTAGATGTG
CCTAATGCCAGTTTGATGATTATTGAGAATGCGGAAAGACTAGGATTATCTCAACTTCATCAATTACGCGGACGTGTCGG
TCGAGGACAGATTGAGTCTTTTTGTGTCCTACTTTATAAAGCGCCGTTGGGCAAAATTTCCCGTCAACGATTGGATATTA
TGCGTAGCAGCAATGATGGTTTTGTCATTGCAGAAAAAGATTTAGAAATCAGAGGACCGGGAGAAGTATTGGGTGTTAAA
CAGACTGGTGTGGCAGAGTTTAAAGTGGCGAATTTAGTGCGCAACAGGCGTTTACTACCGGCAGTGCAACGGTGTGCAAA
TCAGTTAATGCAAATAAATTCGCCCAATATAGAGCAATTAATCCATCGCTGGTTGGATCAAAAGATAGAATATTCCAATG
CATAA

Protein sequence :
MQAETLLDHLPLTVLSGVGVAMSERLSRLGIRSVQDLLFHFPLRYEDRTHITPIIDLRPDSYATIEGIVQTCEVQFGRRP
MLTVSLSDGSSKIMLRFFNFNAGMKNSFSSGARVKAFGEIRRGRFMAEMHHPEYRIIHHNEPLTLDENLTPIYPSTEGLK
QASWRKLTDQALALLDKATIKELLPTEFNPSGYDLKSAVQFLHRPPAGTLSEMLEKGEHPAQQRLAFEELLAHNLAMQKS
KQDAQQNSAIALRYQSNIKQQFLATLPFTPTKAQLRVVEEIEQDLQRSQPMMRLIQGDVGSGKTLVALLASLVALDNQQQ
VAIMAPTEILAEQHLHNFSHWLEPFGIKVGWLAGKVKGKKRQQSLAQIQCGETQVVIGTHALFQEQVEFHSLALVIIDEQ
HRFGVEQRLLLREKGAKNGLYPHQLIMTATPIPRTLAMTVYADLDVSVIDELPPGRTPIKTVAIAEDRRDELVQRVFHAC
TVDKRQVYWVCTLIDESEVLEAQAAEALAEDLRKALPMLKIGLVHGRMKPQEKQDVMAIFKAGEIDVLVATTVIEVGVDV
PNASLMIIENAERLGLSQLHQLRGRVGRGQIESFCVLLYKAPLGKISRQRLDIMRSSNDGFVIAEKDLEIRGPGEVLGVK
QTGVAEFKVANLVRNRRLLPAVQRCANQLMQINSPNIEQLIHRWLDQKIEYSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-99 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_00894 YP_004419819.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 55