Gene Information

Name : UMN179_00697 (UMN179_00697)
Accession : YP_004419626.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 747981 - 749429 bp
Length : 1449 bp
Strand : -
Note : -

DNA sequence :
ATGGCGTGGACTCCGACTCGAACATCTCAGCTTAAAAATTCAACGACAACATTAGCAAAAAATAATAAAGATTTAGAACA
ATTTACGCCGCCGCACTCATTGGAAGCGGAACAGTCAGTGTTGGGGGCATTACTGTTGGATAACGCGTTATGGGACAGCG
TTGCCGAAGCGGTAATTGCTCAAGATTTCTACACTTATGCCCATCGTATCATTTTCCAAGAGATTGAAGCCTTGTTGAGT
TACGGTAAACCGGCGGATTTAATCACGTTGGAGCAGGCATTAAATAGTAAAAATTTAGGTGATTCGGTCGGCGGTTTTTC
CTACTTGGTTGAGTTATCGCAAAAAACGCCGAACAGCGCCAATGCTTTGGCATATGCCAATATTATTCGTGAAAAAGCGA
TTTTGCGTGAGTTGATTGCTGCCAGCAATACCATCTCTGAAAACTGTTATTCCACTAACGGGCAGGATGTGAAAGACATT
CTGGATACCGCTGAAAGTAAGATTTTGCAGATTTCCGAACAGCGAATGGTTGGTACGGAAAGCGGACCGCAGAATGTGAA
TAAAATCCTCAAAGATACCGTCAATAAAATTGAGTTGTTGGCACAAAATCCGAATGGCGGCGTGACCGGAATTTCTACCG
GCTTTACCGATTTGGATAAAAAAACGGCAGGTTTACAACCTGGCGACTTGATTATTGTGGCAGCACGTCCTTCAATGGGG
AAAACCACCTTCGCGATGAATTTGTGTGAAAATGCGGCATTACCGGCGGATCAGGATAAAGCGGTGTTAATCTTTAGCTT
GGAAATGCCGGCGGAACAGCTGATGATGAGAATGCTGTCTTCATTGGCAAGGGTGGATCAAACCAAATTGCGTACCGGTC
AGATCGAATTTGACGGTGCGGAATGGGATGCGCTGGCAAGTTGTATCGGGATGCTGAAACAGAAGCAGAATATCTATATT
GACGACACTTCCGGTTTGACCCCGACGGAACTACGTTCGCGTGCCAGACGTATCCATCGAGAAAGTCCGAACGGTTTGGC
ATTGATTATGGTCGACTATTTGCAGTTAATGCGAGTGCCGGGTTATGCCGAAAACAGAACATTGGAAATTGCAGAAATTT
CACGTTCATTAAAGGCATTGGCTAAAGAGTTGAAAGTGCCGGTGATCGCATTGTCACAGCTAAACCGAAGTTTGGAACAA
CGTGCCGATAAACGTCCGGTCAATTCGGATTTGCGTGAATCAGGTGCGATTGAGCAGGATGCGGACTTGATTATGTTTAT
TTATCGAGATGAGGTTTATAATCCTAATTCCGAATTTAAAGGTACGGCAGAGATTATTATCGGTAAACAGCGTAACGGGC
CAATCGGTAGCGTACGGTTAGCCTTCCAAGGTAATTTCTCGAAATTTACTAATCTTCAGTATGATTCAGGCTATGAAGAT
CATTATTAA

Protein sequence :
MAWTPTRTSQLKNSTTTLAKNNKDLEQFTPPHSLEAEQSVLGALLLDNALWDSVAEAVIAQDFYTYAHRIIFQEIEALLS
YGKPADLITLEQALNSKNLGDSVGGFSYLVELSQKTPNSANALAYANIIREKAILRELIAASNTISENCYSTNGQDVKDI
LDTAESKILQISEQRMVGTESGPQNVNKILKDTVNKIELLAQNPNGGVTGISTGFTDLDKKTAGLQPGDLIIVAARPSMG
KTTFAMNLCENAALPADQDKAVLIFSLEMPAEQLMMRMLSSLARVDQTKLRTGQIEFDGAEWDALASCIGMLKQKQNIYI
DDTSGLTPTELRSRARRIHRESPNGLALIMVDYLQLMRVPGYAENRTLEIAEISRSLKALAKELKVPVIALSQLNRSLEQ
RADKRPVNSDLRESGAIEQDADLIMFIYRDEVYNPNSEFKGTAEIIIGKQRNGPIGSVRLAFQGNFSKFTNLQYDSGYED
HY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 8e-94 49
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-93 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-93 49
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 6e-86 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-77 47
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 9e-94 47
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-87 47
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-87 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 9e-80 45