Gene Information

Name : UMN179_00643 (UMN179_00643)
Accession : YP_004419574.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : N-6 DNA Methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 682663 - 684114 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
TTGCAAGATCCGCAAAATCCGTTCTATCTCGATCCGAATGACTATTCTGCCGAAGAGTATCAAGCTCAGCTTGAGGAAGA
GATGGAAGAACGCGACAACTACACTGCTGAAAATATCTTCTGGGTGCCGGCACAAGCACGTTGGGAAAATCTGAAAAATG
TAGTGATTCTGCGCAAAGGCTCGGAATTGCCTTGGGGCGGCACATTCCGTGGCGTGGCGAATTTAATTGATGATGCCTTC
ACCGCTATCGAAAAAGAGAACCCAAAATTGAAAGGCATTATCCAACGCATTTCCGGCTTTGATGTTGAGGAGCAAACCTT
AATCGGCTTGGTCAATCTCTTTTCCGACACCCATTTTAATCAACCAACCTACAACGGCGAGCCGATTTCCCTAGCGGCGA
AAGATATTCTCGGCCACGTTTATGAATATTTCCTCGGCGAATTTGCGTTGGCAGAGGGCAAGAAAGGCGGTCAATATTTC
ACGCCAAAATCGATTGTAACGCTGATTGTGGAAATGTTGCAGCCGTATCAAGGGCGCATTTATGACCCGGCGATGGGCTC
AGGCGGTTTCTTTGTGCAGACCGAAAAATTTATTGAGGCGCACCAAGGCAATATCAACCAAGTGTCAATTTATGGGCAAG
AATCCAACCCGACCACTTGGAAACTGGCGGCGATGAATATGGCAATTCGTGGTATTGAATTTGATTTTGGCAAAAGCAAC
GCCGACAGCTTCAAACAACCGCAACATATTGATAAGAAAATGGATTTTGTGATGGCAAATCCGCCGTTCAATATGAAAGA
TTGGTGGAATGAATCATTGCAGGATGATCCTCGCTGGCAATACGGCATTCCGCCGGAAGGTAACGCTAACTTTGCTTGGT
TGCAGCATATGCTTTATCACCTTTCGCCGAATGGCAGAATGGGCTTGCTGTTGGCAAACGGTTCAATGAGCAGCCAAACC
GGCGGCGAGGGCGAAATTCGTCAACGCTTGCTTGAAGCCGATTTGGTCGAATGTATGGTTGCGTTGCCGGGGCAACTGTT
CACCAACACGCAAATCCCTGCTTGTATTTGGTTTTTAAATAAAAACAAGCCGCGCGCAAAAGAGGTGCTGTTTATTGATG
CGCGCGAAATTGGTTATATGAAAGATCGGGTTTTGCGTGATTTCACTACCGAAGACATCGCTAAAATTGCCGACACCTAC
CACGCTTGGCAGCAAAACAACGGCTATGAAAACCAAGCGGGCTTCTGCTACGCCGCCAGCCTTGACGAAATCGCCAATAA
TGATTTTGTTCTCACCCCGGGGCGTTATGTCGGCACCGCAGAACAACAAGATGACGGCATACCCTTCGCCGAAAAAATGC
AAAAACTCACCGCACTTTTAAATCAACAATTTGAACAGGGGCGAGAGTTGGAGTCAGAAATTCGCAAAAATTTATTAATG
CTGGGAGCGTAA

Protein sequence :
MQDPQNPFYLDPNDYSAEEYQAQLEEEMEERDNYTAENIFWVPAQARWENLKNVVILRKGSELPWGGTFRGVANLIDDAF
TAIEKENPKLKGIIQRISGFDVEEQTLIGLVNLFSDTHFNQPTYNGEPISLAAKDILGHVYEYFLGEFALAEGKKGGQYF
TPKSIVTLIVEMLQPYQGRIYDPAMGSGGFFVQTEKFIEAHQGNINQVSIYGQESNPTTWKLAAMNMAIRGIEFDFGKSN
ADSFKQPQHIDKKMDFVMANPPFNMKDWWNESLQDDPRWQYGIPPEGNANFAWLQHMLYHLSPNGRMGLLLANGSMSSQT
GGEGEIRQRLLEADLVECMVALPGQLFTNTQIPACIWFLNKNKPRAKEVLFIDAREIGYMKDRVLRDFTTEDIAKIADTY
HAWQQNNGYENQAGFCYAASLDEIANNDFVLTPGRYVGTAEQQDDGIPFAEKMQKLTALLNQQFEQGRELESEIRKNLLM
LGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 2e-153 63
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 3e-113 51
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 9e-114 51
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 6e-112 50