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Name : UMN179_00372 (UMN179_00372) Accession : YP_004419306.1 Strain : Gallibacterium anatis UMN179 Genome accession: NC_015460 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 367976 - 369934 bp Length : 1959 bp Strand : - Note : - DNA sequence : ATGAAATTAATTTTATGTGAGAAGCCATCGCAAGGACGGGATATTGGGAAGTTTATTGGTGCAACAAAAAGAGGGGAAGG ATATTTATCGAGTCCAGATCAGCAAACATTTGTGACTTGGGGAATCGGTCATTTAGTTGAGCAGGCTGAACCTCAGGATT ATGATGAATCCTATAAAAAATGGATATTTGATAATTTACCAATCATACCGGATAAGTGGATTATGAAGGTAAAGAAAGAA ACGGCTAAGCAATATAAGATTGTAATGGGCTTAATTAAAAAAGCTAATCATATTGTTATTGCAACTGACCCCGATAGAGA AGGTGAGGTTATTGCGCGTGAATTATTAGATATGGCTAATTATAAAGGAAAGGTGCAGAGACTTTGGTTGTCCGCTTTAG ATGATGGCAGCATTAGAAAAGCATTGGCTAATTTAAAATCTGATGCAGAAACAAAACCTTTGTATGCCGCAGGATTAGCA AGAGGAAGGGCTGACTGGCTAGTCGGGATGAACTTGACGAGATTATTTACTCTCATCGCTCAAAAGCAAGGGTATCAAGG TGTGATGAGTGTTGGGCGAGTACAGAGTCCGACACTGGCGATTGTAGTACAGCGAGATCGTGAAATTGAAAACTTTGTTT CTAAGCCTTTCTATCGTTTAAAAGTAAACCTTGATGGATTTTGTGCTTATTGGCAACCGACAGAATCGGTTTGCGATGAT GAGGGAAGATGTATTGATTACAGTGTGATTACGCAAGTGCAAAGACAACTATCAAAGACACTTAAAATAGATAATATTGA AACTAAGCGCAAAAAAGAGATGCCTCCACTTGCATTTGATCTCGGGACGTTACAGCAAACTTGCTCTAGATTATTTGGTA TGGGAGCAGCACAAGTGCTAAAGATAGCACAGTCATTATATGAGACACATAAAGCAACGACATATCCAAGAACCGATTGT GGTTATTTACCTGAATCAATGATTGATGAAATTCCGCTTGTGCTAAAAGCTGTATCTGAATCAGATCCTCAAGTTAGAAA TATTGTAGCAAAATTAGATATATCTCTTCGTTCCAGAGTTTGGAATGATAGTAAAATTACGGCTCACCACGGCATTATTC CGACAACTCAAAAAGTTGATTTGAGTAAGATGAGTGACGATGAATTAAAGGTTTATCAGCTTGTACGCAAGCATTATTTT GCTCAGTTTCTACCATTATATGAGGAGGATAATACGAGTGTGCTGTTATCTGGTAATGAGCAGACTTTTGTCTCAAAAGG TAAGCAAGTAATAAAAATAGGATGGAAGTCTCTGTTTCAGCAAGACAGGAATGAAGATGATGAAGAACAATCGCTACCAT CCTTGCGGCAGGGACAATCGTGTAATGTTGTTGATAGTGAGGTTTTAACTTTAAAAACTACACCACCTAAGCATTACACT GAGGGAACATTAATTGCCGCAATGAAAAATGCGGCTCGGTTTGTGACAGATGCCCGATTAAAGCAGAGACTAAGAGAAAC TGAGGGGCTTGGTACAGAAGCTACTCGAGCAGAAGTGATTGAAACATTATTTAAGCGAGGTTACCTTGAGAAAAAGCGCA AGGAAATTGTTGCAACTTCAGCTGGTAGATCTTTAATTGATGGCTTGCCGGATATTATTAAAGATCCGGGTATGACTGCA TTATGGGAACAGGCGTTAAATGATATTGCTTCAGGTAAGATGTTATTACAGGATTTTATGGCTAAGCAGAATCAATTTAT TTCCCACGTAGTGAAATCAATGATTGGTTCTGGGAGTGTGGCAATTCAAGTGAAAGCTGAAAAGATATGCCCTAAATGTG GTGCTGCAATGAGAAGAAGAAAAGGTAAAAACGGTGATTTTTGGGGCTGCTCCAATTATCCTACTTGTACGGCAATAGAA AATATTGGCTCAAGAAAAAGGGTTGGAAAATCACGATAA Protein sequence : MKLILCEKPSQGRDIGKFIGATKRGEGYLSSPDQQTFVTWGIGHLVEQAEPQDYDESYKKWIFDNLPIIPDKWIMKVKKE TAKQYKIVMGLIKKANHIVIATDPDREGEVIARELLDMANYKGKVQRLWLSALDDGSIRKALANLKSDAETKPLYAAGLA RGRADWLVGMNLTRLFTLIAQKQGYQGVMSVGRVQSPTLAIVVQRDREIENFVSKPFYRLKVNLDGFCAYWQPTESVCDD EGRCIDYSVITQVQRQLSKTLKIDNIETKRKKEMPPLAFDLGTLQQTCSRLFGMGAAQVLKIAQSLYETHKATTYPRTDC GYLPESMIDEIPLVLKAVSESDPQVRNIVAKLDISLRSRVWNDSKITAHHGIIPTTQKVDLSKMSDDELKVYQLVRKHYF AQFLPLYEEDNTSVLLSGNEQTFVSKGKQVIKIGWKSLFQQDRNEDDEEQSLPSLRQGQSCNVVDSEVLTLKTTPPKHYT EGTLIAAMKNAARFVTDARLKQRLRETEGLGTEATRAEVIETLFKRGYLEKKRKEIVATSAGRSLIDGLPDIIKDPGMTA LWEQALNDIASGKMLLQDFMAKQNQFISHVVKSMIGSGSVAIQVKAEKICPKCGAAMRRRKGKNGDFWGCSNYPTCTAIE NIGSRKRVGKSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 0.0 | 56 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 6e-173 | 53 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 8e-173 | 53 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 8e-173 | 53 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 2e-166 | 51 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 6e-173 | 50 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 2e-162 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 4e-162 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 1e-126 | 41 |
